RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 SUSD3Q96L08 255 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 NCAPGQ9BPX3 1015 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 SEMA4AQ9H3S1 761 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 MTMR10Q9NXD2 777 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 MTRF1LQ9UGC7 380 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 I3L4J1 428 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 FYNP06241 537 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 MATKP42679 507 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 NDUFV1P49821 464 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 ITGA8P53708 1063 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 PMS2P54278 862 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 CDH6P55285 790 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 PDK2Q15119 407 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 ZC3H12AQ5D1E8 599 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 EMC10Q5UCC4 262 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 HIBCHQ6NVY1 386 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 UBLCP1Q8WVY7 318 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 HAUS1Q96CS2 278 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 KRT82Q9NSB4 513 aa13.08□□□□□ -0.32
CACNA1A-219ENST00000635917 DNM1LO00429 736 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 NBNO60934 754 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 DDHD2O94830 711 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 FAM200BP0CF97 657 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 ODC1P11926 461 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 ATF2P15336 505 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 PCSK1P29120 753 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 CHKAP35790 457 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 CAV1Q03135 178 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 SLMAPQ14BN4 828 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 LRRC8DQ7L1W4 858 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 GPRIN1Q7Z2K8 1008 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 RELL1Q8IUW5 271 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 PQLC3Q8N755 202 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 PLD5Q8N7P1 536 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 KCNK16Q96T55 309 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 NPY6RQ99463 290 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 TMEM121Q9BTD3 319 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 CALN1Q9BXU9 219 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 SEZ6LQ9BYH1 1024 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 FNDC1Q4ZHG4 1894 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-219ENST00000635917 GOLGA6CA6NDK9 693 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 NRP1O14786 923 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 DAB1O75553 588 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 GOLGA6DP0CG33 693 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 ETS1P14921 441 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 SELPP16109 830 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 L1CAMP32004 1257 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 ADCY8P40145 1251 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 GDF10P55107 478 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 DYNLT1P63172 113 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 NOMO1Q15155 1222 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 CEP85LQ5SZL2 805 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 COLGALT2Q8IYK4 626 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 DEFB106AQ8N104 65 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 CRIPAKQ8N1N5 446 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 OR10T2Q8NGX3 314 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
CACNA1A-219ENST00000635917 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms