RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ARFIP2P53365 341 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 KLF1Q13351 362 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TMCO4Q5TGY1 634 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TIGD7Q6NT04 549 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TFB1MQ8WVM0 346 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MAML3Q96JK9 1138 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PRMT1Q99873 361 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SLC4A5Q9BY07 1137 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ERVK-5Q9HDB9 667 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DNPEPQ9ULA0 475 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 EEF2KO00418 725 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SPRP35270 261 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TNFSF9P41273 254 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MARCKSL1P49006 195 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SULT1E1P49888 294 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CDK7P50613 346 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HUNKP57058 714 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SP2Q02086 613 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SMARCB1Q12824 385 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CDO1Q16878 200 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CYS1Q717R9 158 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PHLDB2Q86SQ0 1253 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 LMNTD2Q8IXW0 634 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CALML6Q8TD86 181 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 STAMBPL1Q96FJ0 436 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SNX27Q96L92 541 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 STN1Q9H668 368 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 POPDC2Q9HBU9 364 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 EIF2B3Q9NR50 452 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CDH9Q9ULB4 789 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ATP2C2O75185 946 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GLRA3O75311 464 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 KPNA1P52294 538 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HK2P52789 917 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF33AQ06730 810 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DPYSL3Q14195 570 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SPRYD7Q5W111 196 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ABI1Q8IZP0 508 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GSDMBQ8TAX9 411 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TXLNGYQ9BZA5 131 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GDAP2Q9NXN4 497 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TBK1Q9UHD2 729 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SBF2Q86WG5 1849 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 THP07101 528 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 NFICP08651 508 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ADCYAP1R1P41586 468 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GPD2P43304 727 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RAD23BP54727 409 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TPI1P60174 286 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TRADDQ15628 312 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SLC45A4Q5BKX6 768 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RNASEH2BQ5TBB1 312 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DCAF12L1Q5VU92 463 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 OLFML2BQ68BL8 750 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SCARA3Q6AZY7 606 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 EPS8L3Q8TE67 593 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ELOVL4Q9GZR5 314 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 IKZF4Q9H2S9 585 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MRPL40Q9NQ50 206 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CNGB3Q9NQW8 809 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 AAR2Q9Y312 384 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HEY1Q9Y5J3 304 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HAUS5O94927 633 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CST3P01034 146 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 APOEP02649 317 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MYL4P12829 197 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MATKP42679 507 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 NPY2RP49146 381 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GTF2A1P52655 376 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PTK7Q13308 1070 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TAF1BQ53T94 588 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 FSCBQ5H9T9 825 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RNF43Q68DV7 783 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 FBXO36Q8NEA4 188 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CNKSR2Q8WXI2 1034 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HNRNPABQ99729 332 aaKnown RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SAR1AQ9NR31 198 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 GREB1LQ9C091 1923 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SSC5DA1L4H1 1573 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SDR42E2A6NKP2 422 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SNX3O60493 162 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 F2P00734 622 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ADORA2BP29275 332 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SEC24CP53992 1094 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 MTFR1Q15390 333 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 NBPF20Q3BBV1 942 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DENND1BQ6P3S1 775 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 RHBDF2Q6PJF5 856 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 LRRC34Q8IZ02 419 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DNAAF3Q8N9W5 541 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 PAFAH2Q99487 392 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CNTN3Q9P232 1028 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 DCDC2Q9UHG0 476 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 SQORQ9Y6N5 450 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 ECM29Q5VYK3 1845 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 C3orf70A6NLC5 250 aaPredicted RBP4.73□□□□□ -1.65
SCN1A-210ENST00000635776 TIMM44O43615 452 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 HCAR3P49019 387 aa4.73□□□□□ -1.65
SCN1A-210ENST00000635776 CDK18Q07002 472 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms