RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RPL34P49207 117 aaKnown RBP15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 FANCCQ00597 558 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 USP4Q13107 963 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 NR1I3Q14994 352 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 ZNF77Q15935 545 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 ARHGAP29Q52LW3 1261 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 DENND1BQ6P3S1 775 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 KLHDC10Q6PID8 442 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 TADA2BQ86TJ2 420 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 CDK5RAP1Q96SZ6 601 aaKnown RBP15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 ULBP1Q9BZM6 244 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 CCSER2Q9H7U1 834 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 NLRC4Q9NPP4 1024 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 NAGPAQ9UK23 515 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 FBXL21Q9UKT6 434 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 CEP83Q9Y592 693 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 COL4A2P08572 1712 aa15.51■□□□□ 0.07
CDC42BPB-209ENST00000634889 A0A1W2PQH9 124 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 TMEM221A6NGB7 291 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 M0R296 226 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 ARNTLO00327 626 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 GPR37L1O60883 481 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 FBXO21O94952 628 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 MBL2P11226 248 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 RALAP11233 206 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 GDI1P31150 447 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 STAT1P42224 750 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 PGFP49763 221 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 YWHAGP61981 247 aaKnown RBP eCLIP15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 BMP8AQ7Z5Y6 402 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 SCD5Q86SK9 330 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 GPIHBP1Q8IV16 184 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 EPS8L1Q8TE68 723 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 IRGQQ8WZA9 623 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 NAP1L5Q96NT1 182 aaPredicted RBP15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 LRRC3BQ96PB8 259 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 NACA2Q9H009 215 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 NMUR1Q9HB89 426 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 C11orf16Q9NQ32 467 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 OSER1Q9NX31 292 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 CPQQ9Y646 472 aa15.5■□□□□ 0.07
CDC42BPB-209ENST00000634889 PRR33A8MZF0 331 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 SART1O43290 800 aaKnown RBP15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 GFPT2O94808 682 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 LCP1P13796 627 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 RGS7P49802 495 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 UBASH3AP57075 661 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 MTF1Q14872 753 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 TMEM31Q5JXX7 168 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 CC2D1AQ6P1N0 951 aaPredicted RBP15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 CACNA2D4Q7Z3S7 1137 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 DDX1Q92499 740 aaKnown RBP15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 SLC4A5Q9BY07 1137 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 ARHGEF3Q9NR81 526 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 MYO6Q9UM54 1294 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 TICRRQ7Z2Z1 1910 aa15.49■□□□□ 0.07
CDC42BPB-209ENST00000634889 LEFTY2O00292 366 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 GABBR2O75899 941 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 LSM8O95777 96 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 TPM3P06753 285 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 RARGP13631 454 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 GLULP15104 373 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 MLLT6P55198 1093 aaPredicted RBP15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 SNX16P57768 344 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 DAOAP59103 153 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 ZXDBP98169 803 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 PRKCQQ04759 706 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 PDCLQ13371 301 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 TMEM110Q86TL2 294 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 NOP9Q86U38 636 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 SIX5Q8N196 739 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 RIN3Q8TB24 985 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 SHDQ96IW2 340 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 FAM83CQ9BQN1 747 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 ST7Q9NRC1 585 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 OLA1Q9NTK5 396 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 SMPD4Q9NXE4 827 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 CYTH4Q9UIA0 394 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 DNMT3LQ9UJW3 386 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 TECTAO75443 2155 aa15.48■□□□□ 0.07
CDC42BPB-209ENST00000634889 E2F8A0AVK6 867 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 KRBA1A5PL33 1030 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 FAM86C2PA6NEL3 165 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 YJEFN3A6XGL0 299 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 E7ENQ6 273 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 CCDC172P0C7W6 258 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 GOLGA8FQ08AF8 430 aa15.47■□□□□ 0.07
CDC42BPB-209ENST00000634889 GOLGA8DPQ0D2H9 430 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms