RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 MAP3K13O43283 966 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CYP17A1P05093 508 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 TCF3P15923 654 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 WARSP23381 471 aaKnown RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 TIE1P35590 1138 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 STX17P56962 302 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CRY1Q16526 586 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 UAP1L1Q3KQV9 507 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 TDRD10Q5VZ19 366 aaKnown RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 PMS2CLQ68D20 193 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 TTI2Q6NXR4 508 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CYP2U1Q7Z449 544 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 SFTPA1Q8IWL2 248 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 ZC3H3Q8IXZ2 948 aaKnown RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 ALLCQ8N6M5 410 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 MDGA1Q8NFP4 955 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 MYCBPAPQ8TBZ2 947 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 RLN3Q8WXF3 142 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF516Q92618 1163 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 PIGKQ92643 395 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 SYAP1Q96A49 352 aaPredicted RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 MRPL45Q9BRJ2 306 aaKnown RBP16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 MMP17Q9ULZ9 603 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 CPQQ9Y646 472 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 PTPRDP23468 1912 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF840PA6NDX5 716 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 STX10O60499 249 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 ALDH1A2O94788 518 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 KLF8O95600 359 aaPredicted RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TRIM49P0CI25 452 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TRIM49CP0CI26 452 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TNNC1P63316 161 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 IRX4P78413 519 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 MRPS21P82921 87 aaKnown RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 FOXC1Q12948 553 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TAF10Q12962 218 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 NCOA4Q13772 614 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 DHCR24Q15392 516 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 GAB4Q2WGN9 574 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 DCAF17Q5H9S7 520 aaPredicted RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CCDC183Q5T5S1 534 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 EMC10Q5UCC4 262 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 PGBD3Q8N328 593 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TXNDC5Q8NBS9 432 aaKnown RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 PNKPQ96T60 521 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 ZDHHC4Q9NPG8 344 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 TMEM9BQ9NQ34 198 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CFAP97Q9P2B7 532 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 ARMCX3Q9UH62 379 aaPredicted RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 RALYQ9UKM9 306 aaKnown RBP16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
SNRNP48-203ENST00000634363 CLDN5O00501 218 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 SLC9A3R1O14745 358 aaPredicted RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 FGFR1OPO95684 399 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 APODP05090 189 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 MBL2P11226 248 aaPredicted RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 PFKLP17858 780 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 SPINK2P20155 84 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 PTMSP20962 102 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 ATICP31939 592 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 PIK3CAP42336 1068 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 PPP3CCP48454 512 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 GCLMP48507 274 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 SLC7A9P82251 487 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 MESP2Q0VG99 397 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 ZACNQ401N2 412 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 SV2AQ7L0J3 742 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 ARMCX6Q7L4S7 300 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 RASSF3Q86WH2 238 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 FRMD1Q8N878 549 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 C8orf48Q96LL4 319 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 CEP295NLQ96MC4 621 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 TTLL2Q9BWV7 592 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 RWDD2AQ9UIY3 292 aa16.48■□□□□ 0.23
SNRNP48-203ENST00000634363 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 SGK1O00141 431 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 KAT7O95251 611 aa16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 STAU1O95793 577 aaKnown RBP16.47■□□□□ 0.23
SNRNP48-203ENST00000634363 GNA14O95837 355 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms