RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 CCDC149Q6ZUS6 474 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 LPCAT1Q8NF37 534 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 VPS33AQ96AX1 596 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 REEP2Q9BRK0 252 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PRKD2Q9BZL6 878 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 POLE3Q9NRF9 147 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ADAM30Q9UKF2 790 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ZNF711Q9Y462 761 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 TGM2P21980 687 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 POU1F1P28069 291 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 NUDT2P50583 147 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 RESTQ13127 1097 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PARD6BQ9BYG5 372 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PSMC3IPQ9P2W1 217 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PREX2Q70Z35 1606 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 SLC9A3R1O14745 358 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 TRIM13O60858 407 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ABCB1P08183 1280 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PSMA4P25789 261 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 PKN2Q16513 984 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 RSPH1Q8WYR4 309 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 SERPINB12Q96P63 405 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 DDX47Q9H0S4 455 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 CAAP1Q9H8G2 361 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ABCB6Q9NP58 842 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 AVENQ9NQS1 362 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 TARBP1Q13395 1621 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ROBO2Q9HCK4 1378 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 KPNA3O00505 521 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 FKTNO75072 461 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 SOX6P35712 828 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ZNHIT3Q15649 155 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 C12orf60Q5U649 245 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 RNF44Q7L0R7 432 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 GUF1Q8N442 669 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 EME1Q96AY2 570 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 GRAMD1AQ96CP6 724 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 CNBD2Q96M20 576 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 SLITRK2Q9H156 845 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 FBXO44Q9H4M3 255 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 ELOVL6Q9H5J4 265 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 NT5MQ9NPB1 228 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 SESN1Q9Y6P5 492 aa6.63□□□□□ -1.35
SRGAP1-207ENST00000631006 AP3D1O14617 1153 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 F9P00740 461 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 OR56A5P0C7T3 313 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 CLK2P49760 499 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 CASP8Q14790 479 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 KYNUQ16719 465 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 INSCQ1MX18 579 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 EPHX4Q8IUS5 362 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RDM1Q8NG50 284 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 WDR36Q8NI36 951 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 GPT2Q8TD30 523 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 NACC2Q96BF6 587 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 CXorf40BQ96DE9 158 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 UBE2OQ9C0C9 1292 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 CTNNAL1Q9UBT7 734 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 TRIM10Q9UDY6 481 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 NEU2Q9Y3R4 380 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 TRAV19A0A0A6YYK7 116 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 BIRC5O15392 142 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RTN3O95197 1032 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 GLP2RO95838 553 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 AKR1A1P14550 325 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 FMO5P49326 533 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RPS6P62753 249 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 BYSLQ13895 437 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 SPIDRQ14159 915 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 NFE2Q16621 373 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RETSATQ6NUM9 610 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 SLFN11Q7Z7L1 901 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ACOT1Q86TX2 421 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 SLC35G2Q8TBE7 412 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 MAGEC3Q8TD91 643 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ASZ1Q8WWH4 475 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RNPC3Q96LT9 517 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 IDI2Q9BXS1 227 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 VPS33BQ9H267 617 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ZDHHC6Q9H6R6 413 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ENTPD4Q9Y227 616 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 RRP15Q9Y3B9 282 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 HNRNPCP07910 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 NFIAQ12857 509 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 GRIK3Q13003 919 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 STX5Q13190 355 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 PDIA5Q14554 519 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 NFIL3Q16649 462 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 ESRP1Q6NXG1 681 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 SMIM5Q71RC9 77 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 TRAPPC11Q7Z392 1133 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 MCEMP1Q8IX19 187 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 AHI1Q8N157 1196 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 FICDQ9BVA6 458 aa6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 SUCOQ9UBS9 1254 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-207ENST00000631006 MARCOQ9UEW3 520 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms