RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MEIS3P2A8K0S8 358 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 C9IYK1 514 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 E7ESA3 106 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 E7EVH7 732 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 M0QZQ0 153 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SGK1O00141 431 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PIK3R2O00459 728 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 APOL1O14791 398 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MCF2LO15068 1137 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RGS16O15492 202 aaPredicted RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 HCRTO43612 131 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MGEA5O60502 916 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ATP2C2O75185 946 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 GRAP2O75791 330 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 FBXO21O94952 628 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 EOMESO95936 686 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ZSCAN5DPP0CG00 497 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RBP3P10745 1247 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 LCP1P13796 627 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ETS1P14921 441 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 NPR3P17342 541 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PCSK1P29120 753 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ADORA2BP29275 332 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CD52P31358 61 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 LSP1P33241 339 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MAGEA6P43360 314 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MMP13P45452 471 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 NR2C2P49116 596 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CLCNKBP51801 687 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CDR1P51861 262 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ACLYP53396 1101 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 AIF1P55008 147 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 HNRNPH2P55795 449 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 MAGOHP61326 146 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 YWHAZP63104 245 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 MRPS5P82675 430 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 ATP11AP98196 1134 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CAP1Q01518 475 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ADCY1Q08828 1119 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 KRT81Q14533 505 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RASA2Q15283 850 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 DPYSL2Q16555 572 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SMTNL2Q2TAL5 461 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SLC25A52Q3SY17 297 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RAB6CQ53S08 254 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RAB41Q5JT25 222 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SCYL2Q6P3W7 929 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 FAM171BQ6P995 826 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 DSTYKQ6XUX3 929 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PRUNE1Q86TP1 453 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ZNF598Q86UK7 904 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 CCDC25Q86WR0 208 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 TDRPQ86YL5 185 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 UNC45BQ8IWX7 931 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PPIL6Q8IXY8 311 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PQLC3Q8N755 202 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 NAT8LQ8N9F0 302 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 GLIS1Q8NBF1 620 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PCDH19Q8TAB3 1148 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MYCBPAPQ8TBZ2 947 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RSAD2Q8WXG1 361 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 P3H4Q92791 437 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CAPNS2Q96L46 248 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CFAP57Q96MR6 1250 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SLC2A13Q96QE2 648 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
NEK3-211ENST00000629912 SLC9A7Q96T83 725 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 NPY6RQ99463 290 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 FAM118BQ9BPY3 351 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 ACBD6Q9BR61 282 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 TMEM121Q9BTD3 319 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 SNRNP25Q9BV90 132 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 CALN1Q9BXU9 219 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 FRMD8Q9BZ67 464 aaPredicted RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 RAB6CQ9H0N0 254 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CENPHQ9H3R5 247 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PPCSQ9HAB8 311 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 GPBP1L1Q9HC44 474 aaPredicted RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 NGRNQ9NPE2 291 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 CRTAC1Q9NQ79 661 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RGS18Q9NS28 235 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.8□□□□□ -1.48
NEK3-211ENST00000629912 TMEM51Q9NW97 253 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 MTMR10Q9NXD2 777 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 DDX43Q9NXZ2 648 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 RRN3Q9NYV6 651 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 CWC15Q9P013 229 aaKnown RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 CALCOCO1Q9P1Z2 691 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 RCOR3Q9P2K3 495 aaPredicted RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 SAE1Q9UBE0 346 aaPredicted RBP5.8□□□□□ -1.48
NEK3-211ENST00000629912 FETUBQ9UGM5 382 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 LGALS13Q9UHV8 139 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 PRDM4Q9UKN5 801 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 DSEQ9UL01 958 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 TSC2P49815 1807 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 A0A087WUV0 522 aaPredicted RBP5.79□□□□□ -1.48
NEK3-211ENST00000629912 TLDC2A0PJX2 215 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 MYBPHLA2RUH7 354 aa5.79□□□□□ -1.48
NEK3-211ENST00000629912 GMNCA6NCL1 334 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms