RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CELA2AP08217 269 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CYP2D6P10635 497 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 APEHP13798 732 aaKnown RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 TRIM27P14373 513 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CREB1P16220 341 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 RPL17P18621 184 aaKnown RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 FGFR2P21802 821 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 RBL1P28749 1068 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 EPHB2P29323 1055 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 HTR7P34969 479 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 ARHGAP25P42331 645 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 STT3AP46977 705 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 COPB1P53618 953 aaKnown RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 TUBA4AP68366 448 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 HOXA4Q00056 320 aaPredicted RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 DEUP1Q05D60 604 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 GRM1Q13255 1194 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 PMS2P11Q13670 270 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 LONRF1Q17RB8 773 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 SUPT20HL1Q3ZLR7 823 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CEP78Q5JTW2 689 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CRTC1Q6UUV9 634 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CLEC9AQ6UXN8 241 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 RNF152Q8N8N0 203 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 PJA1Q8NG27 643 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 MAFAQ8NHW3 353 aaPredicted RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 IPCEF1Q8WWN9 437 aaPredicted RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 CTHRC1Q96CG8 243 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 C5orf34Q96MH7 638 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 SELENOOQ9BVL4 669 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 NAA15Q9BXJ9 866 aaKnown RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 SLC25A32Q9H2D1 315 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 HEYLQ9NQ87 328 aaPredicted RBP2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 SLC27A6Q9Y2P4 619 aa2.9□□□□□ -1.95
SCARNA4-201ENST00000629045 A0A1W2PPC4 97 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 DNAJC9-AS1A6NH13 148 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 H7C1Q1 480 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 APOL1O14791 398 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 THAP12O43422 761 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 CA12O43570 354 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 GCATO75600 419 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 NDST3O95803 873 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 LATS1O95835 1130 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 PRR35P0CG20 571 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 ARP10275 920 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 HARSP12081 509 aaKnown RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 MYCLP12524 364 aaPredicted RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 MST1P26927 711 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 ATICP31939 592 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 COPAP53621 1224 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 TBX4P57082 545 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 GPS1Q13098 491 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 IFIT5Q13325 482 aaKnown RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 TBC1D25Q3MII6 688 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 HSP90AB2PQ58FF8 381 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 GRHL2Q6ISB3 625 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 SLC2A7Q6PXP3 512 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 YTHDF3Q7Z739 585 aaKnown RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 SFTPA1Q8IWL2 248 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 FSTL5Q8N475 847 aaPredicted RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 ATP11CQ8NB49 1132 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 ASB2Q96Q27 587 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 QTRT1Q9BXR0 403 aaKnown RBP2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 FAM83DQ9H4H8 585 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 SNX15Q9NRS6 342 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 FLRT1Q9NZU1 646 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 KLHL13Q9P2N7 655 aa2.89□□□□□ -1.95
SCARNA4-201ENST00000629045 WDR91A4D1P6 747 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 CLCA1A8K7I4 914 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 POC1B-GALNT4F8VUJ3 575 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 FOXN3O00409 490 aaPredicted RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 ADAMTS3O15072 1205 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 TMPRSS11DO60235 418 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 SNX2O60749 519 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 PRAMEF2O60811 474 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 USP1O94782 785 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 CYP2A6P11509 494 aaPredicted RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 SFPQP23246 707 aaKnown RBP eCLIP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 TNFSF4P23510 183 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 NEK3P51956 506 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 EIF4A1P60842 406 aaKnown RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 FHL3Q13643 280 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 SEC23BQ15437 767 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 EZH2Q15910 746 aaKnown RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 SRSF7Q16629 238 aaKnown RBP eCLIP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 FAM187BQ17R55 369 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 CERKLQ49MI3 558 aaPredicted RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 ZNF626Q68DY1 528 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 IL31Q6EBC2 164 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 ABLIM2Q6H8Q1 611 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 HIBCHQ6NVY1 386 aaPredicted RBP2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 TMEM65Q6PI78 240 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 MTHFD1LQ6UB35 978 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 DCDC5Q6ZRR9 648 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 RAB11FIP4Q86YS3 637 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 CNGA4Q8IV77 575 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 P3H2Q8IVL5 708 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 SDR16C5Q8N3Y7 309 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 GALNT4Q8N4A0 578 aa2.88□□□□□ -1.95
SCARNA4-201ENST00000629045 LINC01465Q8N7H1 131 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms