RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 SLC9A9Q8IVB4 645 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 NELFCDQ8IXH7 590 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 SCAMP5Q8TAC9 235 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 PARD3BQ8TEW8 1205 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 PIGKQ92643 395 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 SMARCD1Q96GM5 515 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 NUSAP1Q9BXS6 441 aaKnown RBP17.48■□□□□ 0.39
TRIM29-221ENST00000627238 SMYD3Q9H7B4 428 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 CSNK1G1Q9HCP0 422 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 SPHK2Q9NRA0 654 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 DMAC2Q9NW81 257 aa17.48■□□□□ 0.39
TRIM29-221ENST00000627238 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
TRIM29-221ENST00000627238 GREM1O60565 184 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 TULP3O75386 442 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 PTGER3P43115 390 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 ZNF699Q32M78 642 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 TRIM61Q5EBN2 209 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 BTBD8Q5XKL5 378 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 NUDT18Q6ZVK8 323 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 HTR3DQ70Z44 454 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 FUKQ8N0W3 1084 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 TERB1Q8NA31 727 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 RLN3Q8WXF3 142 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 CCSER2Q9H7U1 834 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 TMEM74BQ9NUR3 256 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 DEC1Q9P2X7 70 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
TRIM29-221ENST00000627238 CHORDC1Q9UHD1 332 aaPredicted RBP17.47■□□□□ 0.39
TRIM29-221ENST00000627238 PILRBQ9UKJ0 227 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 SH3BP1Q9Y3L3 701 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 CEP192Q8TEP8 1941 aa17.47■□□□□ 0.39
TRIM29-221ENST00000627238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 TCRBV21S2A2A0A5A6 115 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 TMEM8BA6NDV4 472 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 K7ELQ4 463 aaPredicted RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 EXOC3O60645 756 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 CDH8P55286 799 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 KDSRQ06136 332 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 IFRD2Q12894 506 aaPredicted RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 NCOA4Q13772 614 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 ZNF667Q5HYK9 610 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 SLC36A4Q6YBV0 504 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 PIP4P1Q86T03 277 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 UNC93AQ86WB7 457 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 BBS7Q8IWZ6 715 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 TMEFF1Q8IYR6 380 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 ZNF513Q8N8E2 541 aaPredicted RBP17.46■□□□□ 0.39
TRIM29-221ENST00000627238 ZMIZ2Q8NF64 920 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 CEP76Q8TAP6 659 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 CYLDQ9NQC7 956 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 MARK1Q9P0L2 795 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 HCN2Q9UL51 889 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
TRIM29-221ENST00000627238 PCNX2A6NKB5 2137 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 TBC1D3BA6NDS4 549 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 C1QTNF9BB2RNN3 333 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 POLR2DO15514 142 aaKnown RBP17.45■□□□□ 0.38
TRIM29-221ENST00000627238 MAP3K13O43283 966 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 AP5Z1O43299 807 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 PHACTR2O75167 634 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 VNN1O95497 513 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 C1QTNF9P0C862 333 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 CASP4P49662 377 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 LYSMD4Q5XG99 296 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 FRMD1Q8N878 549 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 HMGB4Q8WW32 186 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 TAF4BQ92750 862 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 SMOQ99835 787 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 SDCBP2Q9H190 292 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 FBXO44Q9H4M3 255 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 SLC39A2Q9NP94 309 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 GMIPQ9P107 970 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIM29-221ENST00000627238 DMXL2Q8TDJ6 3036 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 LAMA5O15230 3695 aa17.45■□□□□ 0.38
TRIM29-221ENST00000627238 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 A0A1W2PQF6 199 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 CACNG3O60359 315 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 TLR5O60602 858 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 AP1G2O75843 785 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
TRIM29-221ENST00000627238 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
TRIM29-221ENST00000627238 P4HA1P13674 534 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 ENGP17813 658 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 GABRG2P18507 467 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 NTSR1P30989 418 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 FOXC1Q12948 553 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 SEMA3BQ13214 749 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 BIRC3Q13489 604 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 ZACNQ401N2 412 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 KLHDC10Q6PID8 442 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 RABEPKQ7Z6M1 372 aa17.44■□□□□ 0.38
TRIM29-221ENST00000627238 TTC30AQ86WT1 665 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms