RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 MTIF3Q9H2K0 278 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 POPDC2Q9HBU9 364 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 RBM12Q9NTZ6 932 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 TMEM51Q9NW97 253 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 ARGLU1Q9NWB6 273 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 COMMD8Q9NX08 183 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 ABI2Q9NYB9 513 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 MTRRQ9UBK8 725 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 STAP1Q9ULZ2 295 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 USP18Q9UMW8 372 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 EFR3BQ9Y2G0 817 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 MRPL42Q9Y6G3 142 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 TRIP11Q15643 1979 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TDRD15B5MCY1 1934 aaKnown RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TSC2P49815 1807 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CAPN9O14815 690 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 GJB5O95377 273 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 LTFP02788 710 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 OR4Q2P0C623 313 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RHOXF2BP0C7M4 288 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CYP2F1P24903 491 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 MIPP30301 263 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 NDUFV1P49821 464 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC5A3P53794 718 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RPL10AP62906 217 aaKnown RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 HTRA4P83105 476 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 DSG1Q02413 1049 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CREMQ03060 361 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 KRT17Q04695 432 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 NAA30Q147X3 362 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 PDK2Q15119 407 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TAF5Q15542 800 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 PSMD5Q16401 504 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TFDP3Q5H9I0 405 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RTP2Q5QGT7 225 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TMEM240Q5SV17 173 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 DAB2IPQ5VWQ8 1189 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC8B1Q6J4K2 584 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TRNP1Q6NT89 227 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 C16orf59Q7L2K0 433 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TAS1R1Q7RTX1 841 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 GPRIN1Q7Z2K8 1008 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 MAATS1Q7Z4T9 603 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 DDX53Q86TM3 631 aaKnown RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 VSIG1Q86XK7 387 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 MAP7D3Q8IWC1 876 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SCN4BQ8IWT1 228 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 DEFB106AQ8N104 65 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 ARHGAP18Q8N392 663 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 FIBCD1Q8N539 461 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 ARFGAP1Q8N6T3 406 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CMASQ8NFW8 434 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM172AQ8WUF8 416 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TEKT4Q8WW24 435 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RIN2Q8WYP3 895 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 HERVK_113Q902F9 699 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CENPIQ92674 756 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SPATA17Q96L03 361 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SLITRK1Q96PX8 696 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC9A7Q96T83 725 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TBCBQ99426 244 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RHOXF2Q9BQY4 288 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 ZBED2Q9BTP6 218 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 C11orf84Q9BUA3 381 aaPredicted RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 AP1M1Q9BXS5 423 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 RHOBTB2Q9BYZ6 727 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 OSBPL8Q9BZF1 889 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 PRO3102Q9H379 93 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 FBXO44Q9H4M3 255 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 ANKZF1Q9H8Y5 726 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 ZWILCHQ9H900 591 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 NGRNQ9NPE2 291 aaKnown RBP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 TMEM30AQ9NV96 361 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 SSX2IPQ9Y2D8 614 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 INSL6Q9Y581 213 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 PCDHB12Q9Y5F1 795 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 USP3Q9Y6I4 520 aa7.88□□□□□ -1.15
PTP4A1-206ENST00000627002 LTBP2Q14767 1821 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 BRCA2P51587 3418 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 MKI67P46013 3256 aaKnown RBP7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 TTC3P53804 2025 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 SCN5AQ14524 2016 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 LRRD1A4D1F6 860 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 MTMR11A4FU01 709 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 YJEFN3A6XGL0 299 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 E7ENQ6 273 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 MDM4O15151 490 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 PHF2O75151 1096 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 ENDOD1O94919 500 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 TJP3O95049 919 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 RTN3O95197 1032 aaPredicted RBP7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 F9P00740 461 aa7.87□□□□□ -1.15
PTP4A1-206ENST00000627002 URODP06132 367 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms