RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RBL1P28749 1068 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 NDST1P52848 882 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 YWHAZP63104 245 aaKnown RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 WDR78Q5VTH9 848 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 GADL1Q6ZQY3 521 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 PLD5Q8N7P1 536 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 CXorf49A8MYA2 514 aaPredicted RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 CCDC22O60826 627 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 DLDP09622 509 aaKnown RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 RGS7P49802 495 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 SLC26A11Q86WA9 606 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 FBXO16Q8IX29 292 aaPredicted RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 NAF1Q96HR8 494 aaKnown RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 SRPK1Q96SB4 655 aaKnown RBP11.72□□□□□ -0.53
VARS2-213ENST00000625423 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 PAK5Q9P286 719 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 TTLL3Q9Y4R7 772 aa11.72□□□□□ -0.53
VARS2-213ENST00000625423 COPEO14579 308 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 SPAG6O75602 509 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 C1QAP02745 245 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 PAX7P23759 505 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 IL4RP24394 825 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 SERPINB4P48594 390 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 CDK16Q00536 496 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 TRIM68Q6AZZ1 485 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 SKA1Q96BD8 255 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 BTBD10Q9BSF8 475 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 IQCGQ9H095 443 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 CYP3A43Q9HB55 503 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 MTO1Q9Y2Z2 717 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 LOC285556D6RIA3 1793 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 EIF4E1BA6NMX2 242 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 HNRNPCL1O60812 293 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 SKAP2O75563 359 aaPredicted RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 TGDSO95455 350 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 CCDC14Q49A88 953 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 TTC39BQ5VTQ0 682 aaPredicted RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 ENDOVQ8N8Q3 282 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 NSL1Q96IY1 281 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 MECRQ9BV79 373 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 RNPEPQ9H4A4 650 aa11.71□□□□□ -0.53
VARS2-213ENST00000625423 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 ZC3H7BQ9UGR2 993 aaKnown RBP11.71□□□□□ -0.53
VARS2-213ENST00000625423 FAM237BA0A1B0GVD1 139 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 KIF1CO43896 1103 aaKnown RBP11.71□□□□□ -0.54
VARS2-213ENST00000625423 APRTP07741 180 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 MYL2P10916 166 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 P4HA1P13674 534 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 ATICP31939 592 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 CA9Q16790 459 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 KHDC1Q4VXA5 237 aaKnown RBP11.71□□□□□ -0.54
VARS2-213ENST00000625423 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.54
VARS2-213ENST00000625423 PQLC3Q8N755 202 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 FGD4Q96M96 766 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 POPDC2Q9HBU9 364 aa11.71□□□□□ -0.54
VARS2-213ENST00000625423 BARX2Q9UMQ3 279 aaPredicted RBP11.71□□□□□ -0.54
VARS2-213ENST00000625423 A0A087WZ62 844 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 E7ENQ6 273 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 APOL1O14791 398 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 GSC2O15499 205 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 UGT1A9O60656 530 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 ZBED1O96006 694 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PFKMP08237 780 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 ABL2P42684 1182 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 BCAR1P56945 870 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 MAP7D3Q8IWC1 876 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 CCDC110Q8TBZ0 833 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 FAXDC2Q96IV6 333 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 FDXACB1Q9BRP7 624 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 TRIM56Q9BRZ2 755 aaKnown RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 UGT1A7Q9HAW7 530 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 UGT1A10Q9HAW8 530 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 UGT1A8Q9HAW9 530 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PLAC1Q9HBJ0 212 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 SMYD2Q9NRG4 433 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
VARS2-213ENST00000625423 LRRC42Q9Y546 428 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 MGAMO43451 1857 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 GYG2O15488 501 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 HBP1O60381 514 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 DNAJC6O75061 913 aa11.7□□□□□ -0.54
VARS2-213ENST00000625423 SNRPAP09012 282 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms