RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 NDRG2Q9UN36 371 aaKnown RBP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 CPQQ9Y646 472 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 COCHO43405 550 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 MBL2P11226 248 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 BCAT1P54687 386 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 STX17P56962 302 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 MTAPQ13126 283 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 ENOSF1Q7L5Y1 443 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 SCML4Q8N228 414 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 ARHGAP18Q8N392 663 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■■ 93.7
LINC00963-217ENST00000624009 GMIPQ9P107 970 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 HESX1Q9UBX0 185 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 CHORDC1Q9UHD1 332 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-217ENST00000624009 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 RALGAPA1Q6GYQ0 2036 aa13.12□□□□□ -0.31
LINC00963-217ENST00000624009 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 TLR5O60602 858 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ATG13O75143 517 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ABL1P00519 1130 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 TDGF1P13385 188 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ARSAP15289 507 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 GJA4P35212 333 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ATP5C1P36542 298 aaKnown RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 SOX9P48436 509 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 PON2Q15165 354 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 TRIM68Q6AZZ1 485 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 PM20D1Q6GTS8 502 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00963-217ENST00000624009 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
LINC00963-217ENST00000624009 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 O00370 1275 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 ADH1CP00326 375 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CXCL12P48061 93 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 ZNF132P52740 706 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CNGA2Q16280 664 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-217ENST00000624009 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 HTR3DQ70Z44 454 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 IRF2BP1Q8IU81 584 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 PPM1KQ8N3J5 372 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
LINC00963-217ENST00000624009 MED15Q96RN5 788 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 PHOX2BQ99453 314 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 NACA2Q9H009 215 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CCSER2Q9H7U1 834 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 WNT6Q9Y6F9 365 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
LINC00963-217ENST00000624009 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
LINC00963-217ENST00000624009 A0A0A0MRY4 1105 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 CCDC163A0A0D9SF12 145 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 PRR23AA6NEV1 266 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 CYP26A1O43174 497 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 LILRB5O75023 590 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 RALAP11233 206 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
LINC00963-217ENST00000624009 FSTL4Q6MZW2 842 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 ALYREFQ86V81 257 aaKnown RBP13.09□□□□□ -0.31
LINC00963-217ENST00000624009 TTC30AQ86WT1 665 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 CD101Q93033 1021 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 HSFY1Q96LI6 401 aa13.09□□□□□ -0.31
LINC00963-217ENST00000624009 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-217ENST00000624009 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
LINC00963-217ENST00000624009 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms