RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 ZSCAN10Q96SZ4 725 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-204ENST00000623364 SEPT5Q99719 369 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-204ENST00000623364 MKRN2Q9H000 416 aaKnown RBP6.96□□□□□ -1.3
CDKL5-204ENST00000623364 ERVMER34-1Q9H9K5 563 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 RPF1Q9H9Y2 349 aaKnown RBP6.96□□□□□ -1.3
CDKL5-204ENST00000623364 USP29Q9HBJ7 922 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 RRN3Q9NYV6 651 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 DEC1Q9P2X7 70 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.3
CDKL5-204ENST00000623364 ZNF106Q9H2Y7 1883 aaKnown RBP6.96□□□□□ -1.3
CDKL5-204ENST00000623364 FOXP2O15409 715 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 ASAP2O43150 1006 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 SEMA4FO95754 770 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 TCF3P15923 654 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 GRIK1P39086 918 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 TRAPPC10P48553 1259 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 LSM11P83369 360 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKL5-204ENST00000623364 RUNX1T1Q06455 604 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
CDKL5-204ENST00000623364 INPP5JQ15735 1006 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-204ENST00000623364 XKR3Q5GH77 459 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 FILIP1Q7Z7B0 1213 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 DSG4Q86SJ6 1040 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 PLA2G4DQ86XP0 818 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 TTC9BQ8N6N2 239 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 TERB1Q8NA31 727 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 OR4C6Q8NH72 309 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 IFI44Q8TCB0 444 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 ARHGAP45Q92619 1136 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 DDX12PQ92771 950 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 SLC6A18Q96N87 628 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 CYP2S1Q96SQ9 504 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 CEP89Q96ST8 783 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 ZNF577Q9BSK1 485 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 RNF41Q9H4P4 317 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-204ENST00000623364 C1orf115Q9H7X2 142 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 CHST11Q9NPF2 352 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 DLL4Q9NR61 685 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 AASDHPPTQ9NRN7 309 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 KCND3Q9UK17 655 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 MYOFQ9NZM1 2061 aa6.95□□□□□ -1.3
CDKL5-204ENST00000623364 POLEQ07864 2286 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 A0A1B0GUA9 196 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 A0A1W2PQ27 194 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 A0A1W2PQ64 194 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 A0A1W2PQC6 194 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 MTMR11A4FU01 709 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 OR6C75A6NL08 312 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 K7EM74 188 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 CYTH3O43739 400 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 JMJD7P0C870 316 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 CD82P27701 267 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 CD38P28907 300 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 ACSL1P33121 698 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 GRM5P41594 1212 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 NOP2P46087 812 aaKnown RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 NT5C2P49902 561 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 ATP1A2P50993 1020 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 YWHAHQ04917 246 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 ALX1Q15699 326 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 UGCGQ16739 394 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 MGAT5BQ3V5L5 792 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 RHBDF2Q6PJF5 856 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 RAB11FIP2Q7L804 512 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 TMPRSS9Q7Z410 1059 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 CDR2LQ86X02 465 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 EXOC8Q8IYI6 725 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 KIAA1958Q8N8K9 716 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 SCFD1Q8WVM8 642 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 ARSGQ96EG1 525 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 PPP1R10Q96QC0 940 aaKnown RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 SH2D3AQ9BRG2 576 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 CXCL16Q9H2A7 254 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 COPG2Q9UBF2 871 aa6.94□□□□□ -1.3
CDKL5-204ENST00000623364 KLF2Q9Y5W3 355 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-204ENST00000623364 A0A0G2JK05 382 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 PRAMEF33A0A0G2JMD5 474 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 TMEM150BA6NC51 233 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 PODXLO00592 558 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 FFAR2O15552 330 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 PRAMEF10O60809 474 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 SDC3O75056 442 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 TULP3O75386 442 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 OAZ2O95190 189 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ALPPL2P10696 532 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ATF6P18850 670 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms