RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 NRLP54845 237 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 TMEM62Q0P6H9 643 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 GRB14Q14449 540 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 KCNJ11Q14654 390 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 RALGAPA2Q2PPJ7 1873 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 HHATQ5VTY9 493 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 IQSEC1Q6DN90 963 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 NOTUMQ6P988 496 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 KHSRPQ92945 711 aaKnown RBP eCLIP8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 EIF2AQ9BY44 585 aaKnown RBP8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 FAM49AQ9H0Q0 323 aaPredicted RBP8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 USP29Q9HBJ7 922 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 PCDH18Q9HCL0 1135 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 PAK5Q9P286 719 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 TUBGCP4Q9UGJ1 667 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 CHMP2BQ9UQN3 213 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 NME7Q9Y5B8 376 aa8.67□□□□□ -1.02
SND1-IT1-201ENST00000623342 MDM4O15151 490 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 KCNN4O15554 427 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 PAPSS1O43252 624 aaPredicted RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 GPR32O75388 356 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ELK3P41970 407 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 BCAR1P56945 870 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 BNIP1Q12981 228 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 DNAJC3Q13217 504 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 MTM1Q13496 603 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 PCBP1Q15365 356 aaKnown RBP eCLIP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SLC1A5Q15758 541 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SNCBQ16143 134 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 C9orf57Q5W0N0 161 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ARHGAP17Q68EM7 881 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SLC9A4Q6AI14 798 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 FITM2Q8N6M3 262 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 PQLC3Q8N755 202 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 OR6B3Q8NGW1 331 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 LRRC8CQ8TDW0 803 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 MZB1Q8WU39 189 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 DCAKDQ8WVC6 231 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 C18orf25Q96B23 403 aaPredicted RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 FAF2Q96CS3 445 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 RTP4Q96DX8 246 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 RMDN2Q96LZ7 410 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CYTH2Q99418 400 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ZNF670Q9BS34 389 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SNRNP25Q9BV90 132 aaKnown RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ECT2Q9H8V3 914 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 GPATCH2LQ9NWQ4 482 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 GRID1Q9ULK0 1009 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 PHTF1Q9UMS5 762 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 TEX264Q9Y6I9 313 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 BCLAF3A2AJT9 711 aaKnown RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 A8MXQ7 604 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ZNF487B1APH4 448 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CHUKO15111 745 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 MGRN1O60291 552 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SPAG6O75602 509 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ZBED1O96006 694 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 NCALDP61601 193 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ELF3P78545 371 aaPredicted RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CCDC15Q0P6D6 951 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CBLBQ13191 982 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SOWAHAQ2M3V2 549 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 GLRA4Q5JXX5 417 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ALKAL1Q6UXT8 129 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 IGDCC3Q8IVU1 814 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 PCDH19Q8TAB3 1148 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 BRI3BPQ8WY22 251 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 ALKBH8Q96BT7 664 aaKnown RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 FRMD8Q9BZ67 464 aaPredicted RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CDHR5Q9HBB8 845 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 HES2Q9Y543 173 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 HEY1Q9Y5J3 304 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 SCN1AP35498 2009 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 KAT6AQ92794 2004 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 NRCAMQ92823 1304 aa8.66□□□□□ -1.02
SND1-IT1-201ENST00000623342 IQANK1A0A1B0GTG1 560 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 SMIM35A0A1B0GVV1 85 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 KBTBD13C9JR72 458 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 EDF1O60869 148 aaKnown RBP8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 GABBR2O75899 941 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 RECQL4O94761 1208 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 DARSP14868 501 aaKnown RBP8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 RBL1P28749 1068 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 PTPN9P43378 593 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 HDAC4P56524 1084 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 MGAT5Q09328 741 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 SEPT7Q16181 437 aaKnown RBP8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 GPR162Q16538 588 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 CA9Q16790 459 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 PLEKHH3Q7Z736 793 aa8.65□□□□□ -1.02
SND1-IT1-201ENST00000623342 TBC1D1Q86TI0 1168 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms