RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 SPATA6LQ8N4H0 392 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 CCT7Q99832 543 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 NUF2Q9BZD4 464 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 UBP1Q9NZI7 540 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 WNT7BP56706 349 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 POU5F1BQ06416 359 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 DPYSL3Q14195 570 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 C6orf52Q5T4I8 152 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 RNASEH2BQ5TBB1 312 aaKnown RBP19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 TTC39BQ5VTQ0 682 aaPredicted RBP19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 CMC1Q7Z7K0 106 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 SLC26A11Q86WA9 606 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 SIAH1Q8IUQ4 282 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 ZNF516Q92618 1163 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 CDRT15Q96T59 188 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 APOBEC3GQ9HC16 384 aaKnown RBP19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 SPATA31D3P0C874 917 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 MLH1P40692 756 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 C16orf72Q14CZ0 275 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 FOXB2Q5VYV0 432 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 DENND1BQ6P3S1 775 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 SPATA31D4Q6ZUB0 917 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 Q9H521 79 aa19.04■□□□□ 0.64
GTF2IP1-210ENST00000622829 TNNC2P02585 160 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 GJB1P08034 283 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 KATNAL2Q8IYT4 538 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 RNF168Q8IYW5 571 aaPredicted RBP19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 FAM136AQ96C01 138 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 CHCHD3Q9NX63 227 aaKnown RBP19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 SHOC2Q9UQ13 582 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 hCG_1818297A0A087WSY0 165 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 E7ENQ6 273 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 P4HA2O15460 535 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 WFS1O76024 890 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 KRT7P08729 469 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 VCLP18206 1134 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 TFE3P19532 575 aaPredicted RBP19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 MIPP30301 263 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 FOLH1Q04609 750 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 RAB6CQ53S08 254 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 RNF149Q8NC42 400 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 RAB6CQ9H0N0 254 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 ACSS3Q9H6R3 686 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 GTSE1Q9NYZ3 720 aa19.03■□□□□ 0.64
GTF2IP1-210ENST00000622829 CASQ2O14958 399 aaPredicted RBP19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 TP73O15350 636 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 ATP6V1G1O75348 118 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 MOXD1Q6UVY6 613 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 ALKBH8Q96BT7 664 aaKnown RBP19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 FNDC3AQ9Y2H6 1198 aaKnown RBP19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 MYPNQ86TC9 1320 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 ROBO3Q96MS0 1386 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 PKD1L3Q7Z443 1732 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 KLHL33A6NCF5 533 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 ITM2AO43736 263 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 GCAP28676 217 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 PDPK2PQ6A1A2 396 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 DHDDSQ86SQ9 333 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 TRIM42Q8IWZ5 723 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 RYBPQ8N488 228 aaPredicted RBP19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 NLRP7Q8WX94 980 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 CATSPER2Q96P56 530 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 SPATA16Q9BXB7 569 aa19.02■□□□□ 0.64
GTF2IP1-210ENST00000622829 AMHP03971 560 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 CCR3P51677 355 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 CCDC15Q0P6D6 951 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 PRPSAP1Q14558 356 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 LBRQ14739 615 aaKnown RBP19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 ZC3H12AQ5D1E8 599 aaKnown RBP19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 PCDH20Q8N6Y1 951 aaKnown RBP19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 CDKL2Q92772 493 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 SYT11Q9BT88 431 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 RNF146Q9NTX7 359 aa19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 HERC5Q9UII4 1024 aaKnown RBP19.02■□□□□ 0.63
GTF2IP1-210ENST00000622829 LIN7AO14910 233 aaPredicted RBP19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 TM9SF1O15321 606 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 PRPF4O43172 522 aaKnown RBP eCLIP19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 GPC3P51654 580 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 NCKAP1LP55160 1127 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 OR52E8Q6IFG1 317 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 AMIGO2Q86SJ2 522 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 ARHGAP18Q8N392 663 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 SIKE1Q9BRV8 207 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 SNX13Q9Y5W8 968 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 ACTL7BQ9Y614 415 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 C15orf38-AP3S2A0A0A6YYH1 394 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 WDR27A2RRH5 827 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 TYROBPO43914 113 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 RARBP10826 455 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 ZNF667Q5HYK9 610 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 SPDYAQ5MJ70 313 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 ARPINQ7Z6K5 226 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 DENND1AQ8TEH3 1009 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 MRPL46Q9H2W6 279 aaKnown RBP19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 DMAP1Q9NPF5 467 aaPredicted RBP19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 KANSL3Q9P2N6 904 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 HMGCRP04035 888 aa19.01■□□□□ 0.63
GTF2IP1-210ENST00000622829 KLRC2P26717 231 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms