RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 ABRAQ8N0Z2 381 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 AGBL3Q8NEM8 1001 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 GIMAP1Q8WWP7 306 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 ZNF212Q9UDV6 495 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 GSTTP1A0A1W2PQM5 241 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 TLR3O15455 904 aaKnown RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 TCEA3O75764 348 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 PSMG1O95456 288 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 KRT10P13645 584 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 GNA15P30679 374 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 ACTR2P61160 394 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 TUBA1BP68363 451 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 CLDN10P78369 228 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 CRY1Q16526 586 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 ZNF423Q2M1K9 1284 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 TUBA1AQ71U36 451 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 UBE2Q1Q7Z7E8 422 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 CCDC89Q8N998 374 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 GABPB2Q8TAK5 448 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 TEPSINQ96N21 525 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 C2orf49Q9BVC5 232 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 PARVBQ9HBI1 364 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 JPH1Q9HDC5 661 aaPredicted RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
LITAF-221ENST00000622633 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
LITAF-221ENST00000622633 EGFRP00533 1210 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 APOEP02649 317 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 ZSCAN5DPP0CG00 497 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 TCF4P15884 667 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 STX2P32856 288 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 GRM2Q14416 872 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 LPIN1Q14693 890 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 NR1D2Q14995 579 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 HP1BP3Q5SSJ5 553 aaPredicted RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 ZFYVE27Q5T4F4 411 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 GLIS1Q8NBF1 620 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 EGLN2Q96KS0 407 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 MRGBPQ9NV56 204 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 MSL3P1P0C860 447 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 KLRC2P26717 231 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 MAGEA4P43358 317 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 STRN3Q13033 797 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 PLEKHA7Q6IQ23 1121 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 CROCCP3Q8IVE0 287 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 EXD1Q8NHP7 514 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 ANKRD36BP1Q96IX9 119 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 RBM15Q96T37 977 aaKnown RBP eCLIP12.94□□□□□ -0.34
LITAF-221ENST00000622633 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
LITAF-221ENST00000622633 SLC9A2Q9UBY0 812 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 ZNHIT2Q9UHR6 403 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 TLL2Q9Y6L7 1015 aa12.94□□□□□ -0.34
LITAF-221ENST00000622633 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
LITAF-221ENST00000622633 CDH16O75309 829 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 ETS1P14921 441 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 IL4RP24394 825 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 ENPEPQ07075 957 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 NFX1Q12986 1120 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 TMED2Q15363 201 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 ABHD15Q6UXT9 468 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 IZUMO2Q6UXV1 221 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 TTC30BQ8N4P2 665 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 GOLM1Q8NBJ4 401 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 BBOF1Q8ND07 529 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 USP6NLQ92738 828 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 CCDC77Q9BR77 488 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 RBM38Q9H0Z9 239 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms