RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 ZNF518BQ9C0D4 1074 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 NDST4Q9H3R1 872 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 POLR3BQ9NW08 1133 aaPredicted RBP22.31■■□□□ 1.16
PMPCA-212ENST00000622209 GCNT4Q9P109 453 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 WNT6Q9Y6F9 365 aa22.31■■□□□ 1.16
PMPCA-212ENST00000622209 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.31■■□□□ 1.16
PMPCA-212ENST00000622209 CLDN5O00501 218 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 GJA4P35212 333 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 GCNT1Q02742 428 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 ANO6Q4KMQ2 910 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 PAQR9Q6ZVX9 377 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 FAM35AQ86V20 835 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 WDR5BQ86VZ2 330 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 FUKQ8N0W3 1084 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 C12orf29Q8N999 325 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 SMARCD1Q96GM5 515 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 TMEM176AQ96HP8 235 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 HNRNPABQ99729 332 aaKnown RBP22.3■■□□□ 1.16
PMPCA-212ENST00000622209 BPIFA3Q9BQP9 254 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 ECT2Q9H8V3 914 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 FANCLQ9NW38 375 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 EHD2Q9NZN4 543 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 NCOR2Q9Y618 2525 aa22.3■■□□□ 1.16
PMPCA-212ENST00000622209 F8VP50 259 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 RNF40O75150 1001 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 HDCP19113 662 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 HOXA6P31267 233 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 IFNAR2P48551 515 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 RAD23BP54727 409 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 ZNF77Q15935 545 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 EXOC3L4Q17RC7 722 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 ZNF394Q53GI3 561 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 MIIPQ5JXC2 388 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 CPA6Q8N4T0 437 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 UBR7Q8N806 425 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 SLC4A11Q8NBS3 891 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 SLC2A14Q8TDB8 520 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 SH3RF2Q8TEC5 729 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 OSCP1Q8WVF1 389 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 JAKMIP2Q96AA8 810 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 CYFIP2Q96F07 1278 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 FAM81BQ96LP2 452 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 HEXIM2Q96MH2 286 aaKnown RBP22.29■■□□□ 1.16
PMPCA-212ENST00000622209 P2RY13Q9BPV8 354 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 CRACR2AQ9BSW2 395 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 FUCA2Q9BTY2 467 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 LINC00597Q9H2U6 94 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 SLC8A2Q9UPR5 921 aa22.29■■□□□ 1.16
PMPCA-212ENST00000622209 DCDC2BA2VCK2 349 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 ATG13O75143 517 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 CCDC130P13994 396 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 USP46P62068 366 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 TRIM65Q6PJ69 517 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 ARHGEF19Q8IW93 802 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 FAM160A2Q8N612 972 aaPredicted RBP22.28■■□□□ 1.16
PMPCA-212ENST00000622209 CSNK1G1Q9HCP0 422 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 SEMA4GQ9NTN9 838 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 FAM49BQ9NUQ9 324 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 KIAA1257Q9ULG3 409 aa22.28■■□□□ 1.16
PMPCA-212ENST00000622209 NUP210Q8TEM1 1887 aaPredicted RBP22.28■■□□□ 1.16
PMPCA-212ENST00000622209 SYCE3A1L190 88 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 AP1G2O75843 785 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 TPM2P07951 284 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 DRD1P21728 446 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 CACNA2D1P54289 1103 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 USP4Q13107 963 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 NCAPHQ15003 741 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 DENND5BQ6ZUT9 1274 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 RRAGAQ7L523 313 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 ENOSF1Q7L5Y1 443 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 ATP2A3Q93084 1043 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 UBE2TQ9NPD8 197 aaPredicted RBP22.27■■□□□ 1.16
PMPCA-212ENST00000622209 DMAP1Q9NPF5 467 aaPredicted RBP22.27■■□□□ 1.16
PMPCA-212ENST00000622209 TMEM30AQ9NV96 361 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 TRPM5Q9NZQ8 1165 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 PTPRDP23468 1912 aa22.27■■□□□ 1.16
PMPCA-212ENST00000622209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.26■■□□□ 1.15
PMPCA-212ENST00000622209 SMTNL1A8MU46 457 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 AXIN1O15169 862 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 FAM200BP0CF97 657 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 SLC9A1P19634 815 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 ACO1P21399 889 aaKnown RBP22.26■■□□□ 1.15
PMPCA-212ENST00000622209 PON1P27169 355 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 EML3Q32P44 896 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 SMYD5Q6GMV2 418 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 ANKRD20A12PQ8NF67 263 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 TTLL2Q9BWV7 592 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 KRT82Q9NSB4 513 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 PCDHB4Q9Y5E5 795 aa22.26■■□□□ 1.15
PMPCA-212ENST00000622209 PES1O00541 588 aaKnown RBP22.25■■□□□ 1.15
PMPCA-212ENST00000622209 LRP3O75074 770 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 ABL1P00519 1130 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 PAEPP09466 180 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 ADORA2BP29275 332 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 MFAP3P55082 362 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 KRT31Q15323 416 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 CSRP2Q16527 193 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 PPP1R26Q5T8A7 1209 aaPredicted RBP22.25■■□□□ 1.15
PMPCA-212ENST00000622209 ARHGAP17Q68EM7 881 aa22.25■■□□□ 1.15
PMPCA-212ENST00000622209 TMEM270Q6UE05 265 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms