RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 H0YCG3 227 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 APOC4-APOC2K7ER74 178 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 TBC1D12O60347 775 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 DKC1O60832 514 aaKnown RBP eCLIP16.4■□□□□ 0.223e-6■■■■■ 48.3
NPHP4-211ENST00000622020 APOC2P02655 101 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 DHRS4L1P0CG22 281 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 HSPA1LP34931 641 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ZC3H12AQ5D1E8 599 aaKnown RBP16.4■□□□□ 0.22
NPHP4-211ENST00000622020 RSPH3Q86UC2 560 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 MPP5Q8N3R9 675 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 TTC13Q8NBP0 860 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 PHACTR1Q9C0D0 580 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 IL1RAPL1Q9NZN1 696 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 SLC7A8Q9UHI5 535 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 PACSIN3Q9UKS6 424 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 B4GALT5O43286 388 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ASPAP45381 313 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 RGS7P49802 495 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 AP1B1Q10567 949 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 CFAP157Q5JU67 520 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 SH2D5Q6ZV89 423 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 POLNQ7Z5Q5 900 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 SLC26A11Q86WA9 606 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ADPGKQ9BRR6 497 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ETAA1Q9NY74 926 aa16.4■□□□□ 0.22
NPHP4-211ENST00000622020 ADGRA2Q96PE1 1338 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 M0QYV0 167 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 SNUPNO95149 360 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 LSM8O95777 96 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 FESP07332 822 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 CSH1P0DML2 217 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 CSH2P0DML3 217 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 ETS2P15036 469 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 RTP1P59025 263 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 YWHAZP63104 245 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 XYLT1Q86Y38 959 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 ULK2Q8IYT8 1036 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 TRAPPC12Q8WVT3 735 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 FGD4Q96M96 766 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 NLRP4Q96MN2 994 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 DHX33Q9H6R0 707 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 PPCSQ9HAB8 311 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 LOC100653049A0A140TA62 436 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 KLHL33A6NCF5 533 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 HNRNPCL1O60812 293 aaKnown RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 KRT34O76011 436 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 PDE5AO76074 875 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 ANPEPP15144 967 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 RALGPS1Q5JS13 557 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 TTC39BQ5VTQ0 682 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-211ENST00000622020 RDM1Q8NG50 284 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
NPHP4-211ENST00000622020 ZMPSTE24O75844 475 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 KRT37O76014 449 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 NPTXRO95502 500 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 HMGCRP04035 888 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 C6orf222P0C671 652 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 KCNA4P22459 653 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 ARL2P36404 184 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 OCRLQ01968 901 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 KRT81Q14533 505 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 LBRQ14739 615 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 RASIP1Q5U651 963 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 OR6B2Q6IFH4 312 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 UBR7Q8N806 425 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 MTBPQ96DY7 904 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 PGLYRP2Q96PD5 576 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 GBP5Q96PP8 586 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TUBGCP5Q96RT8 1024 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TRIM4Q9C037 500 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 CPSF2Q9P2I0 782 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 PLLPQ9Y342 182 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 SPECC1L-ADORA2AF8WAN1 911 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 AHCYL1O43865 530 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 CIB2O75838 187 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TRUB2O95900 331 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 SNRPAP09012 282 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 CXCL8P10145 99 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 YWHAEP62258 255 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 RBBP5Q15291 538 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TUBB6Q9BUF5 446 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 INO80BQ9C086 356 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-211ENST00000622020 SDCBP2Q9H190 292 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 TTLL3Q9Y4R7 772 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 THSD7AQ9UPZ6 1657 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 KIAA1217Q5T5P2 1943 aa16.38■□□□□ 0.21
NPHP4-211ENST00000622020 ADCY3O60266 1144 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 DNAJC6O75061 913 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms