RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 USP1O94782 785 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 CHRM5P08912 532 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 PARP1P09874 1014 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 APEHP13798 732 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 CREB1P16220 341 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 TPH1P17752 444 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 ATF3P18847 181 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 BTF3P20290 206 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 MCM5P33992 734 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 CARSP49589 748 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 MTHFSP49914 203 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 GATMP50440 423 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 COPB1P53618 953 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 DAZAP2Q15038 168 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 CERKLQ49MI3 558 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 PLAG1Q6DJT9 500 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 RAB11FIP4Q86YS3 637 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 WDR75Q8IWA0 830 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 LINC01465Q8N7H1 131 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 MSLNLQ96KJ4 702 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 RGS17Q9UGC6 210 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-229ENST00000621897 ASAP1Q9ULH1 1129 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 UBE2Q2LH0YL09 131 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 M0R3H8 397 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 GCATO75600 419 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 BCAR3O75815 825 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 TOP3BO95985 862 aaKnown RBP5.31□□□□□ -1.56
BRCA1-229ENST00000621897 MT-CO3P00414 261 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 HTRA4P83105 476 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-229ENST00000621897 DEUP1Q05D60 604 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 MIS18BP1Q6P0N0 1132 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 USP49Q70CQ1 688 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 CNGA4Q8IV77 575 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 ADAMTS18Q8TE60 1221 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 ZC3H10Q96K80 434 aaKnown RBP5.31□□□□□ -1.56
BRCA1-229ENST00000621897 EFHD1Q9BUP0 239 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 PRSS22Q9GZN4 317 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 SPRTNQ9H040 489 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-229ENST00000621897 PRDM11Q9NQV5 511 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 TFCP2L1Q9NZI6 479 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 VPS51Q9UID3 782 aa5.31□□□□□ -1.56
BRCA1-229ENST00000621897 MT-ND5P03915 603 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 ATF7P17544 494 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-229ENST00000621897 IL1R2P27930 398 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 FMNL3Q8IVF7 1028 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 MAFAQ8NHW3 353 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-229ENST00000621897 PNISRQ8TF01 805 aaKnown RBP5.3□□□□□ -1.56
BRCA1-229ENST00000621897 SNX22Q96L94 193 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 CCDC17Q96LX7 622 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 FYTTD1Q96QD9 318 aaKnown RBP5.3□□□□□ -1.56
BRCA1-229ENST00000621897 SNX15Q9NRS6 342 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 MGAT4CQ9UBM8 478 aa5.3□□□□□ -1.56
BRCA1-229ENST00000621897 SCAF8Q9UPN6 1271 aaKnown RBP5.3□□□□□ -1.56
BRCA1-229ENST00000621897 CYP2D7A0A087X1C5 515 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 AQP7P3A6NL99 342 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 BTBD19C9JJ37 291 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
BRCA1-229ENST00000621897 Q4G0T1 1027 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 MANEALQ5VSG8 457 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 ZNF48Q96MX3 618 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-229ENST00000621897 BTBD1Q9H0C5 482 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 TBC1D23Q9NUY8 699 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 ZNF212Q9UDV6 495 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 CAPN11Q9UMQ6 739 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 CORO2BQ9UQ03 480 aa5.29□□□□□ -1.56
BRCA1-229ENST00000621897 TMEM232C9JQI7 657 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 FCHO1O14526 889 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 TMPRSS11DO60235 418 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 MOSPD3O75425 235 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 A1BGP04217 495 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 ATP5F1P24539 256 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-229ENST00000621897 FHL3Q13643 280 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 ZNF268Q14587 947 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-229ENST00000621897 LARS2Q15031 903 aaKnown RBP5.28□□□□□ -1.56
BRCA1-229ENST00000621897 SEC23BQ15437 767 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 EPHA10Q5JZY3 1008 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 TMEM65Q6PI78 240 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 CLEC9AQ6UXN8 241 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 ZNF813Q6ZN06 617 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 ZNF398Q8TD17 642 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 DENND1AQ8TEH3 1009 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 PHKBQ93100 1093 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 HIST1H2AAQ96QV6 131 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 SELENOOQ9BVL4 669 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 FAM83DQ9H4H8 585 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 SLC27A6Q9Y2P4 619 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 SNX13Q9Y5W8 968 aa5.28□□□□□ -1.56
BRCA1-229ENST00000621897 A0A087WZ62 844 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 E5RJQ4 531 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 HTR7P34969 479 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 COPAP53621 1224 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 MEX3CQ5U5Q3 659 aaKnown RBP5.27□□□□□ -1.57
BRCA1-229ENST00000621897 RRAGBQ5VZM2 374 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
BRCA1-229ENST00000621897 KRT78Q8N1N4 520 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms