RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 PBKQ96KB5 322 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 TCF25Q9BQ70 676 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 C11orf84Q9BUA3 381 aaPredicted RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 ENTPD7Q9NQZ7 604 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 HSFX1Q9UBD0 423 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 MTUS1Q9ULD2 1270 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
CPNE3-212ENST00000621783 PCDHA11Q9Y5I1 949 aa11.16□□□□□ -0.62
CPNE3-212ENST00000621783 H0YGN5 161 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 TEX28O15482 410 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 CSPG5O95196 566 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 LTFP02788 710 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 CNPP09543 421 aaKnown RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 DESP17661 470 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 TFE3P19532 575 aaPredicted RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 DNAJB1P25685 340 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 MIPP30301 263 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 NOS2P35228 1153 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 MATKP42679 507 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 USP46P62068 366 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 YWHAZP63104 245 aaKnown RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 ATP11AP98196 1134 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 UBE3AQ05086 875 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 CKAP4Q07065 602 aaKnown RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 ZNF211Q13398 564 aaPredicted RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 ACAP1Q15027 740 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 RAB6CQ53S08 254 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 OTUD1Q5VV17 481 aaPredicted RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 PLPP4Q5VZY2 271 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 TXNRD3NBQ6F5E7 133 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 LRRN4CLQ8ND94 238 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 ZNF461Q8TAF7 563 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SPPL3Q8TCT6 385 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 GPR152Q8TDT2 470 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 POF1BQ8WVV4 589 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 MS4A14Q96JA4 679 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SAMD11Q96NU1 681 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 TBCBQ99426 244 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 DDX23Q9BUQ8 820 aaKnown RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 CARD6Q9BX69 1037 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 RAB6CQ9H0N0 254 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 CARD9Q9H257 536 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 POPDC2Q9HBU9 364 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SMARCAL1Q9NZC9 954 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 YIPF1Q9Y548 306 aa11.15□□□□□ -0.62
CPNE3-212ENST00000621783 SLC38A8A6NNN8 435 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 CEP104O60308 925 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 RNF8O76064 485 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 RTN3O95197 1032 aaPredicted RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SLU7O95391 586 aaKnown RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 CXCL14O95715 111 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 KRT1P04264 644 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 FYNP06241 537 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 RB1P06400 928 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 ATF2P15336 505 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 IL1R2P27930 398 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 PCK1P35558 622 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 PBX2P40425 430 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 TUFMP49411 452 aaKnown RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 HDAC4P56524 1084 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 RWDD2BP57060 319 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 ERVFC1P60507 584 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 YWHAGP61981 247 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 PITX1P78337 314 aaPredicted RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SMC1AQ14683 1233 aaKnown RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 HADHQ16836 314 aaKnown RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 DCAF6Q58WW2 860 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 LRRC38Q5VT99 294 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 SYPL2Q5VXT5 272 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 DENND5BQ6ZUT9 1274 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 STRADAQ7RTN6 431 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 TMC7Q7Z402 723 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 KATNAL2Q8IYT4 538 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 RASGEF1CQ8N431 466 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 CEP112Q8N8E3 955 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 GIPC2Q8TF65 315 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 GOLGA1Q92805 767 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 FBXO32Q969P5 355 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 ACSF2Q96CM8 615 aaPredicted RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 KLHL5Q96PQ7 755 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 TGS1Q96RS0 853 aaKnown RBP11.14□□□□□ -0.63
CPNE3-212ENST00000621783 PEBP4Q96S96 227 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 NPY6RQ99463 290 aa11.14□□□□□ -0.63
CPNE3-212ENST00000621783 TRIM62Q9BVG3 475 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms