RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 FBXO32Q969P5 355 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 SLITRK1Q96PX8 696 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 ACOX2Q99424 681 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 IL37Q9NZH6 218 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 GMIPQ9P107 970 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
TARDBP-225ENST00000621715 KLK13Q9UKR3 277 aa17.78■□□□□ 0.44
TARDBP-225ENST00000621715 R3HCC1Q9Y3T6 440 aaKnown RBP17.78■□□□□ 0.44
TARDBP-225ENST00000621715 ANKRD11Q6UB99 2663 aaPredicted RBP17.78■□□□□ 0.44
TARDBP-225ENST00000621715 SMG1Q96Q15 3661 aaKnown RBP17.77■□□□□ 0.44
TARDBP-225ENST00000621715 A0A1W2PQF6 199 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 E2F8A0AVK6 867 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 SRRM3A6NNA2 597 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-225ENST00000621715 A8MXQ7 604 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
TARDBP-225ENST00000621715 HOXC11O43248 304 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-225ENST00000621715 MAP3K13O43283 966 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 SLC5A3P53794 718 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 TNNC1P63316 161 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 SEMA3BQ13214 749 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 ORC1Q13415 861 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 LYSMD4Q5XG99 296 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 SLC23A3Q6PIS1 610 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 SLC6A17Q9H1V8 727 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 POLMQ9NP87 494 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-225ENST00000621715 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.44
TARDBP-225ENST00000621715 FASNP49327 2511 aaKnown RBP17.76■□□□□ 0.43
TARDBP-225ENST00000621715 TBX18O95935 607 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 ZDHHC11BP0C7U3 371 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 IRF1P10914 325 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-225ENST00000621715 HSF5Q4G112 596 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-225ENST00000621715 FAM26FQ5R3K3 315 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 SNX30Q5VWJ9 437 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 EGFLAMQ63HQ2 1017 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 SLC41A1Q8IVJ1 513 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 FUKQ8N0W3 1084 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 PGBD3Q8N328 593 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 ZNF513Q8N8E2 541 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-225ENST00000621715 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 DHX58Q96C10 678 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 SPACA7Q96KW9 195 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 CAPN10Q9HC96 672 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 KIAA1586Q9HCI6 787 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
TARDBP-225ENST00000621715 FAM92AA1XBS5 289 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 TBC1D3BA6NDS4 549 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 VNN1O95497 513 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 STAU1O95793 577 aaKnown RBP17.75■□□□□ 0.43
TARDBP-225ENST00000621715 CFIP05156 583 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 ASIC1P78348 528 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 GAD2Q05329 585 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 LMAN2Q12907 356 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 COL9A2Q14055 689 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-225ENST00000621715 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 HECTD3Q5T447 861 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 SHC4Q6S5L8 630 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 SCARA5Q6ZMJ2 495 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 TOGARAM2Q6ZUX3 1019 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 DDX42Q86XP3 938 aaKnown RBP eCLIP17.75■□□□□ 0.43
TARDBP-225ENST00000621715 TERB1Q8NA31 727 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 SMOQ99835 787 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 NUSAP1Q9BXS6 441 aaKnown RBP17.75■□□□□ 0.43
TARDBP-225ENST00000621715 BLZF1Q9H2G9 400 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 SPHK2Q9NRA0 654 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 OSER1Q9NX31 292 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 TBC1D14Q9P2M4 693 aa17.75■□□□□ 0.43
TARDBP-225ENST00000621715 IGHV1OR15-9A0A0B4J2B8 117 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 PRRT4C9JH25 899 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 FAM163BP0C2L3 166 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 CCDC130P13994 396 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 PDCP20941 246 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 SIM1P81133 766 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 RPL6Q02878 288 aaKnown RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 ANO4Q32M45 955 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 CNNM4Q6P4Q7 775 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 STXBP4Q6ZWJ1 553 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 GPRIN1Q7Z2K8 1008 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 ZCCHC14Q8WYQ9 949 aaKnown RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 OVCA2Q8WZ82 227 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 CAMK1GQ96NX5 476 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 GTPBP2Q9BX10 602 aaKnown RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 KRT82Q9NSB4 513 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 TFIP11Q9UBB9 837 aaKnown RBP17.74■□□□□ 0.43
TARDBP-225ENST00000621715 RAD54BQ9Y620 910 aa17.74■□□□□ 0.43
TARDBP-225ENST00000621715 LRRIQ3A6PVS8 624 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-225ENST00000621715 TAF4O00268 1085 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 RTN3O95197 1032 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-225ENST00000621715 CD59P13987 128 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 HOXB2P14652 356 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 NDUFV2P19404 249 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 ACOT1Q86TX2 421 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 C7orf25Q9BPX7 421 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms