RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
VPS11-208ENST00000621676 CETN2P41208 172 aa11□□□□□ -0.65
VPS11-208ENST00000621676 DEFB103AP81534 67 aa11□□□□□ -0.65
VPS11-208ENST00000621676 TAF12Q16514 161 aa11□□□□□ -0.65
VPS11-208ENST00000621676 NOMO2Q5JPE7 1267 aa11□□□□□ -0.65
VPS11-208ENST00000621676 CCDC13Q8IYE1 715 aa11□□□□□ -0.65
VPS11-208ENST00000621676 PXYLP1Q8TE99 480 aa11□□□□□ -0.65
VPS11-208ENST00000621676 ATXN7L3BQ96GX2 97 aa11□□□□□ -0.65
VPS11-208ENST00000621676 TNIP3Q96KP6 325 aa11□□□□□ -0.65
VPS11-208ENST00000621676 NFKBIZQ9BYH8 718 aa11□□□□□ -0.65
VPS11-208ENST00000621676 VPS37BQ9H9H4 285 aa11□□□□□ -0.65
VPS11-208ENST00000621676 OGFRQ9NZT2 677 aa11□□□□□ -0.65
VPS11-208ENST00000621676 HPCAL4Q9UM19 191 aa11□□□□□ -0.65
VPS11-208ENST00000621676 A0A0A6YYK5 440 aaPredicted RBP11□□□□□ -0.65
VPS11-208ENST00000621676 TCRBV7S3A2A0A539 114 aa11□□□□□ -0.65
VPS11-208ENST00000621676 RAG1P15918 1043 aa11□□□□□ -0.65
VPS11-208ENST00000621676 ABCG1P45844 678 aa11□□□□□ -0.65
VPS11-208ENST00000621676 EIF3EP60228 445 aaKnown RBP11□□□□□ -0.65
VPS11-208ENST00000621676 BYSLQ13895 437 aaKnown RBP11□□□□□ -0.65
VPS11-208ENST00000621676 EML3Q32P44 896 aa11□□□□□ -0.65
VPS11-208ENST00000621676 MAP9Q49MG5 647 aa11□□□□□ -0.65
VPS11-208ENST00000621676 CCSAPQ6IQ19 270 aaPredicted RBP11□□□□□ -0.65
VPS11-208ENST00000621676 RBM23Q86U06 439 aaKnown RBP11□□□□□ -0.65
VPS11-208ENST00000621676 RNF135Q8IUD6 432 aa11□□□□□ -0.65
VPS11-208ENST00000621676 SPATA2LQ8IUW3 424 aaPredicted RBP11□□□□□ -0.65
VPS11-208ENST00000621676 ANKRD42Q8N9B4 389 aa11□□□□□ -0.65
VPS11-208ENST00000621676 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
VPS11-208ENST00000621676 ERP44Q9BS26 406 aa11□□□□□ -0.65
VPS11-208ENST00000621676 C12orf65Q9H3J6 166 aaKnown RBP11□□□□□ -0.65
VPS11-208ENST00000621676 INTUQ9ULD6 942 aa11□□□□□ -0.65
VPS11-208ENST00000621676 NOVA2Q9UNW9 492 aaKnown RBP11□□□□□ -0.65
VPS11-208ENST00000621676 MAD1L1Q9Y6D9 718 aa11□□□□□ -0.65
VPS11-208ENST00000621676 CDY1Q9Y6F8 540 aa11□□□□□ -0.65
VPS11-208ENST00000621676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 APRTP07741 180 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 EN2P19622 333 aaPredicted RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 GRIA1P42261 906 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PGGT1BP53609 377 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 UPP1Q16831 310 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 LCLAT1Q6UWP7 414 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 SLC24A5Q71RS6 500 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 EPS8L3Q8TE67 593 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 SLC35F5Q8WV83 523 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 SLITRK1Q96PX8 696 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PPANQ9NQ55 473 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 ANAPC5Q9UJX4 755 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 WDFY4Q6ZS81 3184 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 MIF4GDA9UHW6 222 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 GOLGA8KD6RF30 607 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 GOLGA8TH3BQL2 631 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ENPP3O14638 875 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ATF2P15336 505 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 CREB1P16220 341 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 HSD17B3P37058 310 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 DEUP1Q05D60 604 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 EFEMP1Q12805 493 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 IZUMO3Q5VZ72 239 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 METTL23Q86XA0 190 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 FMNL3Q8IVF7 1028 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PAF1Q8N7H5 531 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 ANLNQ9NQW6 1124 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ALDH2P05091 517 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 NPR3P17342 541 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 RBL1P28749 1068 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ATICP31939 592 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 OR1D2P34982 312 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 ALDH7A1P49419 539 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 HDAC4P56524 1084 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 SLC6A3Q01959 620 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 GUCY1A3Q02108 690 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 BST2Q10589 180 aaKnown RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
VPS11-208ENST00000621676 ZNF677Q86XU0 584 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 P3H4Q92791 437 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 CD101Q93033 1021 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 SAYSD1Q9NPB0 183 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 KCNK9Q9NPC2 374 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PIGVQ9NUD9 493 aa10.99□□□□□ -0.65
VPS11-208ENST00000621676 PHF2O75151 1096 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 SAT1P21673 171 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 KDELR1P24390 212 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 USP46P62068 366 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 RTP2Q5QGT7 225 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ANKRD22Q5VYY1 191 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 TRIM72Q6ZMU5 477 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ZBED8Q8IZ13 594 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 CFAP52Q8N1V2 620 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ANKRD52Q8NB46 1076 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ZMIZ2Q8NF64 920 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ASNSD1Q9NWL6 643 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 PLK2Q9NYY3 685 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 DOCK6Q96HP0 2047 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 GOLGA6CA6NDK9 693 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms