RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 COL4A3Q01955 1670 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 YJEFN3A6XGL0 299 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 E7ENQ6 273 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 COCHO43405 550 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 ABL1P00519 1130 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 GYPCP04921 128 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 LCP1P13796 627 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 AVPR1AP37288 418 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 DAOAP59103 153 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 TDGQ13569 410 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 HFE2Q6ZVN8 426 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 TMEM110Q86TL2 294 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 PIWIL1Q96J94 861 aaKnown RBP15.05■□□□□ -0
CBWD3-217ENST00000621474 SYT11Q9BT88 431 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 CNGB3Q9NQW8 809 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 TLR8Q9NR97 1041 aaKnown RBP15.05■□□□□ -0
CBWD3-217ENST00000621474 TDP1Q9NUW8 608 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.05■□□□□ -0
CBWD3-217ENST00000621474 ITIH6Q6UXX5 1313 aa15.05■□□□□ -0
CBWD3-217ENST00000621474 TRAV19A0A0A6YYK7 116 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 A0A1W2PQJ5 194 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 HEPACAM2A8MVW5 462 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 E5RJQ4 531 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 TNFRSF10AO00220 468 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 PAPSS1O43252 624 aaPredicted RBP15.04■□□□□ -0
CBWD3-217ENST00000621474 TLR5O60602 858 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 TBX18O95935 607 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 PFKLP17858 780 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 HDCP19113 662 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 KRT9P35527 623 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 SLC7A9P82251 487 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 CDR2Q01850 454 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 ARID5AQ03989 594 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 FCHO2Q0JRZ9 810 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 GRM2Q14416 872 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 EDEM3Q9BZQ6 932 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 ST7Q9NRC1 585 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 NUDT5Q9UKK9 219 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
CBWD3-217ENST00000621474 ARNTLO00327 626 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 CYP1A1P04798 512 aaPredicted RBP15.03■□□□□ -0
CBWD3-217ENST00000621474 CKMP06732 381 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ZNF268Q14587 947 aaPredicted RBP15.03■□□□□ -0
CBWD3-217ENST00000621474 ZNF77Q15935 545 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 HECTD3Q5T447 861 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ZNF677Q86XU0 584 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 VSTM4Q8IW00 320 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 MFSD6LQ8IWD5 586 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 SCUBE3Q8IX30 993 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 SIX6OS1Q8N1H7 587 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ZNF276Q8N554 614 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 CELF5Q8N6W0 485 aaKnown RBP15.03■□□□□ -0
CBWD3-217ENST00000621474 PCDHB18PQ96TA0 734 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 OBP2AQ9NY56 170 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 CLIC5Q9NZA1 410 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 NAGPAQ9UK23 515 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ARHGAP26Q9UNA1 814 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 FAM170AA1A519 330 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 DCXO43602 365 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ERBB2P04626 1255 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 RARGP13631 454 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 PSMC3P17980 439 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 PSEN1P49768 467 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 YWHAGP61981 247 aaKnown RBP eCLIP15.03■□□□□ -0
CBWD3-217ENST00000621474 NOMO3P69849 1222 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 GPC5P78333 572 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 USP4Q13107 963 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 IER5LQ5T953 404 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 ASIC4Q96FT7 647 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 NUP58Q9BVL2 599 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 MIS12Q9H081 205 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 CAPN11Q9UMQ6 739 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 CPQQ9Y646 472 aa15.03■□□□□ -0
CBWD3-217ENST00000621474 MYOFQ9NZM1 2061 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 MDM4O15151 490 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 CBFA2T2O43439 604 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 LSM8O95777 96 aaKnown RBP15.02□□□□□ -0.01
CBWD3-217ENST00000621474 FYNP06241 537 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 TPM3P06753 285 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 SRFP11831 508 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 UNGP13051 313 aaPredicted RBP15.02□□□□□ -0.01
CBWD3-217ENST00000621474 TCF3P15923 654 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 FERP16591 822 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 ACADSBP45954 432 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 ZXDAP98168 799 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 BSPRYQ5W0U4 402 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 KLHDC10Q6PID8 442 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 BPIFB1Q8TDL5 484 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 DEPDC1BQ8WUY9 529 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 E2F7Q96AV8 911 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 PPP1R13BQ96KQ4 1090 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 KIF9Q9HAQ2 790 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 SLC2A4RGQ9NR83 387 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 SMPD4Q9NXE4 827 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 F5P12259 2224 aa15.02□□□□□ -0.01
CBWD3-217ENST00000621474 LEFTY2O00292 366 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 GREM1O60565 184 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms