RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 COMTP21964 271 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 LSP1P33241 339 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 HALP42357 657 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 RAP1GAPP47736 663 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 KLHDC7AQ5VTJ3 777 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM71DQ8N9W8 422 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FAR2Q96K12 515 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 OMDQ99983 421 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF518BQ9C0D4 1074 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 GLTPD2A6NH11 291 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 GRK4P32298 578 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 CDC16Q13042 620 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PDK2Q15119 407 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 LLGL2Q6P1M3 1020 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM131BQ86XD5 332 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF614Q8N883 585 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SERPINB11Q96P15 392 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FRMD8Q9BZ67 464 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PNMA8BQ9ULN7 279 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 MEGF6O75095 1541 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 EVPLLA8MZ36 301 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 RAMP2O60895 175 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 HMGCRP04035 888 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 MSH3P20585 1137 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 ACAT1P24752 427 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PTPN3P26045 913 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 STIP1P31948 543 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FLT3LGP49771 235 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 HDAC4P56524 1084 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 MYL6P60660 151 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PTPN11Q06124 597 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 ACAD10Q6JQN1 1059 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 KIAA1324Q6UXG2 1013 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 CATSPERGQ6ZRH7 1159 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TRMT11Q7Z4G4 463 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 STAMBPL1Q96FJ0 436 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PPP1R16AQ96I34 528 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 CBWD1Q9BRT8 395 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SYT17Q9BSW7 474 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM167BQ9BTA0 163 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TRABDQ9H4I3 376 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 ASB7Q9H672 318 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SYTL2Q9HCH5 934 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 RRN3Q9NYV6 651 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TRIM16O95361 564 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 IGSF6O95976 241 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PDHA1P08559 390 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SP100P23497 879 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TJAP1Q5JTD0 557 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 APOBEC3HQ6NTF7 200 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 NUP93Q8N1F7 819 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 B4GALNT2Q8NHY0 566 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SH3GL3Q99963 347 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 PCMTD2Q9NV79 361 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 SF3B1O75533 1304 aaKnown RBP eCLIP10.11□□□□□ -0.794e-6■■■■■ 174.1
CLTCL1-211ENST00000621271 F8W810 466 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 AP5Z1O43299 807 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 MTA2O94776 668 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 TGM2P21980 687 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 PRAMEF19Q5SWL8 479 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ZFYVE19Q96K21 471 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 GAD1Q99259 594 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 MIR1-1HGQ9H1L0 117 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 TRAV19A0A0A6YYK7 116 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ACKR2O00590 384 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 GUCA1CO95843 209 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 GNRH1P01148 92 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ACOX1Q15067 660 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 FBXL19Q6PCT2 694 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ABTB1Q969K4 478 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ARL8AQ96BM9 186 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 TADA1Q96BN2 335 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 WNK4Q96J92 1243 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 FOXP3Q9BZS1 431 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 NT5MQ9NPB1 228 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 KCNQ5Q9NR82 932 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 CISHQ9NSE2 258 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 GYPCP04921 128 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 CYP2A6P11509 494 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 CDH2P19022 906 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 OR1E1P30953 314 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 HNRNPH1P31943 449 aaKnown RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 CARSP49589 748 aaKnown RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 EDEM1Q92611 657 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 ALG13Q9NP73 1137 aaKnown RBP10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 MRGBPQ9NV56 204 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 AP4E1Q9UPM8 1137 aa10.11□□□□□ -0.79
CLTCL1-211ENST00000621271 CDY2AQ9Y6F7 541 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms