RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MROH9Q5TGP6 573 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 MAML3Q96JK9 1138 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 SCYL1Q96KG9 808 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 MFSD14AQ96MC6 490 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 KATNAL1Q9BW62 490 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 KLC2Q9H0B6 622 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 VPS11Q9H270 941 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 DDX56Q9NY93 547 aaKnown RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 ABI2Q9NYB9 513 aaPredicted RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 DOCK2Q92608 1830 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 LYPLA2O95372 231 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 HOXD10P28358 340 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 GRIK1P39086 918 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 GEN1Q17RS7 908 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TXNRD3NBQ6F5E7 133 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 RAPH1Q70E73 1250 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 EXD1Q8NHP7 514 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 USP33Q8TEY7 942 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 NAF1Q96HR8 494 aaKnown RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 ZNF560Q96MR9 790 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 ANKRD27Q96NW4 1050 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 SHCBP1LQ9BZQ2 653 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 SLCO1B3Q9NPD5 702 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 WHRNQ9P202 907 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 ARHGAP28Q9P2N2 729 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 PTPRJQ12913 1337 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 MROH7Q68CQ1 1323 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 A0A0B4J269 797 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 CYB561D2O14569 222 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PSTPIP1O43586 416 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ATP9BO43861 1147 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PQBP1O60828 265 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 SHOX2O60902 331 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 HAUS5O94927 633 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 CCDC130P13994 396 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ATP4AP20648 1035 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 RABGGTBP53611 331 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 WNT7BP56706 349 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 HTRA3P83110 453 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 MTHFD1LQ6UB35 978 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 LMO3Q8TAP4 145 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 RMDN2Q96LZ7 410 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 FAM111AQ96PZ2 611 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TTC1Q99614 292 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TRIM55Q9BYV6 548 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ANLNQ9NQW6 1124 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 KLHL8Q9P2G9 620 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZC3H7BQ9UGR2 993 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 PCYOX1Q9UHG3 505 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 USP18Q9UMW8 372 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 L3MBTL1Q9Y468 752 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 MYH4Q9Y623 1939 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ECM29Q5VYK3 1845 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 IQANK1A0A1B0GTG1 560 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 DNAJC6O75061 913 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
GGA3-222ENST00000621217 AKR1A1P14550 325 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 MLH1P40692 756 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 CENPCQ03188 943 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PTK7Q13308 1070 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 IQSEC1Q6DN90 963 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 CD302Q8IX05 232 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 DTX3LQ8TDB6 740 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 EDEM1Q92611 657 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZBED3Q96IU2 234 aaPredicted RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 TNIP3Q96KP6 325 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 LRGUKQ96M69 825 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 SERPINB12Q96P63 405 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 PCMTD2Q9NV79 361 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 GRHL1Q9NZI5 618 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 HAO1Q9UJM8 370 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 SCAMP3O14828 347 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 HNRNPCL1O60812 293 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 TADA2AO75478 443 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TMCC1O94876 653 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 MIPP30301 263 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TAF6P49848 677 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 MAP3K7CLP57077 242 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TAF5Q15542 800 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 GLIS1Q8NBF1 620 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 NPLOC4Q8TAT6 608 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 SLC7A14Q8TBB6 771 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
GGA3-222ENST00000621217 TTC25Q96NG3 672 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 TMEM237Q96Q45 408 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 LPIN3Q9BQK8 851 aa9.42□□□□□ -0.9
GGA3-222ENST00000621217 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms