RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 APPL1Q9UKG1 709 aa10.77□□□□□ -0.69
VPS11-207ENST00000620429 PCDHGB4Q9UN71 923 aa10.77□□□□□ -0.69
VPS11-207ENST00000620429 POLIQ9UNA4 740 aa10.77□□□□□ -0.69
VPS11-207ENST00000620429 ERGIC3Q9Y282 383 aa10.77□□□□□ -0.69
VPS11-207ENST00000620429 PCDHGB5Q9Y5G0 923 aa10.77□□□□□ -0.69
VPS11-207ENST00000620429 KRBA1A5PL33 1030 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CAPN8A6NHC0 703 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CCNT2O60583 730 aaKnown RBP10.76□□□□□ -0.69
VPS11-207ENST00000620429 GCNT3O95395 438 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CRTAMO95727 393 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 C8BP07358 591 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CA4P22748 312 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
VPS11-207ENST00000620429 ERFP50548 548 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 PRELPP51888 382 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 GRAMD1BQ3KR37 738 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 BTBD8Q5XKL5 378 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CCDC105Q8IYK2 499 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 SLC25A41Q8N5S1 370 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 RBM15Q96T37 977 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS11-207ENST00000620429 IMPG2Q9BZV3 1241 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CNGB3Q9NQW8 809 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 TAGLN3Q9UI15 199 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 COG5Q9UP83 839 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ALG6Q9Y672 507 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 UNCXA6NJT0 531 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 MIF4GDA9UHW6 222 aaKnown RBP10.76□□□□□ -0.69
VPS11-207ENST00000620429 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 IL1BP01584 269 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 DLDP09622 509 aaKnown RBP10.76□□□□□ -0.69
VPS11-207ENST00000620429 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CHRNB2P17787 502 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ENPP1P22413 925 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CPA2P48052 419 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ZNF543Q08ER8 600 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 KCNA1Q09470 495 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 AOC3Q16853 763 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 KAZNQ674X7 775 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ITPRIPL1Q6GPH6 555 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 IYDQ6PHW0 289 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 LVRNQ6Q4G3 990 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 CCDC81Q6ZN84 652 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 TTC7BQ86TV6 843 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 UBL4BQ8N7F7 174 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 GSTCDQ8NEC7 633 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 KRT35Q92764 455 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 NUF2Q9BZD4 464 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 GPRC5DQ9NZD1 345 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
VPS11-207ENST00000620429 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 GTF3C4Q9UKN8 822 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 DNM3Q9UQ16 869 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 DNAJC16Q9Y2G8 782 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 AP4B1Q9Y6B7 739 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 ASTN1O14525 1302 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
VPS11-207ENST00000620429 GTPBP10A4D1E9 387 aaKnown RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 SLC16A3O15427 465 aaKnown RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 GUCY1B2O75343 617 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 P4HA1P13674 534 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TAL1P17542 331 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 CIITAP33076 1130 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 S100A5P33763 92 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 PIK3CAP42336 1068 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ALDH1A3P47895 512 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 MARCKSL1P49006 195 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 SNAP25P60880 206 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ATP6V0D1P61421 351 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 IGBP1P78318 339 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 OVGP1Q12889 678 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 CCNIQ14094 377 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 HIC1Q14526 733 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TBCCQ15814 346 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 CYP2A13Q16696 494 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ARHGAP44Q17R89 818 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TIGD2Q4W5G0 525 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TMTC4Q5T4D3 741 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 HHIPL2Q6UWX4 724 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 GPR180Q86V85 440 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TTLL6Q8N841 843 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 PDZD8Q8NEN9 1154 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TBC1D15Q8TC07 691 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ZNF641Q96N77 438 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 NMUR2Q9GZQ4 415 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 BCAS3Q9H6U6 928 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 KIAA1586Q9HCI6 787 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 ANKRD62A6NC57 917 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms