RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 TSHRP16473 764 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CDH2P19022 906 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 VCAM1P19320 739 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SERPINB1P30740 379 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SKIV2L2P42285 1042 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 RECQLP46063 649 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 C1QBPQ07021 282 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 MKRN4PQ13434 485 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ZNF568Q3ZCX4 644 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZNF484Q5JVG2 852 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 METTL21CQ5VZV1 264 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ARHGAP22Q7Z5H3 698 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 INPP5DQ92835 1189 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TMA16Q96EY4 203 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 CHORDC1Q9UHD1 332 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ZNF232Q9UNY5 417 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TECPR2O15040 1411 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NRXN1Q9ULB1 1477 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DPPA5A6NC42 116 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ALOX15BO15296 676 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 TGFB3P10600 412 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ACOT2P49753 483 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 WASHC5Q12768 1159 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 TRIM32Q13049 653 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 TOP3AQ13472 1001 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 EMC10Q5UCC4 262 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SV2AQ7L0J3 742 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 LRRC8DQ7L1W4 858 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 NT5DC3Q86UY8 548 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 LRRC57Q8N9N7 239 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ZNF280CQ8ND82 737 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 CHST13Q8NET6 341 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SH3KBP1Q96B97 665 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 CDRT15Q96T59 188 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 CLK1P49759 484 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 TBL3Q12788 808 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 PRKAA1Q13131 559 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 PARP6Q2NL67 630 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 GOLGA7BQ2TAP0 167 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 MIIPQ5JXC2 388 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 C1orf186Q6ZWK4 172 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 CAMK1DQ8IU85 385 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ZDHHC17Q8IUH5 632 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 STX19Q8N4C7 294 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 FOPNLQ96NB1 174 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 MMTAG2Q9BU76 263 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 LRRC42Q9Y546 428 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ITSN2Q9NZM3 1697 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SNTNA6NMZ2 147 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ATP9AO75110 1047 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 HMGCRP04035 888 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SERPINE1P05121 402 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 FGRP09769 529 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 NUDT17P0C025 328 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 GRIK1P39086 918 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 BAATQ14032 418 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 EMC2Q15006 297 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 TRIM16LQ309B1 348 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 EFHC1Q5JVL4 640 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 CWF19L1Q69YN2 538 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 TDRD5Q8NAT2 981 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 RIN3Q8TB24 985 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 FBXO25Q8TCJ0 367 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ATG4AQ8WYN0 398 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 DNAJC19Q96DA6 116 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 RPAP3Q9H6T3 665 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 RIOX1Q9H6W3 641 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 NMRK1Q9NWW6 199 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 EVLQ9UI08 416 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 LRFN2Q9ULH4 789 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SHOC2Q9UQ13 582 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 DDHD2O94830 711 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SLC4A1P02730 911 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 STAG3L1P0CL83 205 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 FAM98BQ52LJ0 330 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 DCAF6Q58WW2 860 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 SPATA2LQ8IUW3 424 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 BBS7Q8IWZ6 715 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 VGLL2Q8N8G2 317 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ULK4Q96C45 1275 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 YIPF4Q9BSR8 244 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 RUBCNLQ9H714 662 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 AGO4Q9HCK5 861 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 ZNF112Q9UJU3 913 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 ZCCHC11Q5TAX3 1644 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 C2orf81A6NN90 581 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 HIST1H2AGP0C0S8 130 aaPredicted RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 VDRP11473 427 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 HIST1H2ADP20671 130 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 RGS7P49802 495 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 CACHD1Q5VU97 1274 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 DENND5BQ6ZUT9 1274 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 APPL2Q8NEU8 664 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 GPRASP2Q96D09 838 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 HIST1H2AHQ96KK5 128 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 POP1Q99575 1024 aaKnown RBP3.15□□□□□ -1.9
LPP-221ENST00000618621 HIST1H2AJQ99878 128 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 H2AFJQ9BTM1 129 aa3.15□□□□□ -1.9
LPP-221ENST00000618621 DNAJC16Q9Y2G8 782 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms