RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ROPN1BQ9BZX4 212 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PABPC3Q9H361 631 aaKnown RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 ROPN1Q9HAT0 212 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 RRN3Q9NYV6 651 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 TAF1P21675 1872 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 GPR25O00155 361 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 TSPAN1O60635 241 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 ADSSP30520 456 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 CCDC33Q8N5R6 958 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 TTC8Q8TAM2 541 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 ASIC4Q96FT7 647 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PPCSQ9HAB8 311 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PSMC3IPQ9P2W1 217 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 L1RE1Q9UN81 338 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 GIT1Q9Y2X7 761 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 DERAQ9Y315 318 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 FIS1Q9Y3D6 152 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 F8W8V4 182 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 RARAP10276 462 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 KCNA10Q16322 511 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 HELQQ8TDG4 1101 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 MAML1Q92585 1016 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 EXT2Q93063 718 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 PGLYRP2Q96PD5 576 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 FUT8Q9BYC5 575 aa14.41□□□□□ -0.1
CIITA-213ENST00000618327 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
CIITA-213ENST00000618327 HSPA4LO95757 839 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 BDNFP23560 247 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 CYP2F1P24903 491 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 GRK4P32298 578 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 HSPA9P38646 679 aaKnown RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 TRIM55Q9BYV6 548 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 DCLK3Q9C098 648 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 FBXO44Q9H4M3 255 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 TXLNGQ9NUQ3 528 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 TRPM5Q9NZQ8 1165 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 CST3P01034 146 aaPredicted RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 FDFT1P37268 417 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 BTG3Q14201 252 aaPredicted RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 CCL14Q16627 93 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 ZNF449Q6P9G9 518 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 SPDL1Q96EA4 605 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 ATXN7L3BQ96GX2 97 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 CCDC78A2IDD5 438 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 VCPP55072 806 aaKnown RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 GUCY1A3Q02108 690 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 PCSK7Q16549 785 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 AGBL2Q5U5Z8 902 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 APTXQ7Z2E3 356 aaKnown RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 ZSWIM2Q8NEG5 633 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 THOC1Q96FV9 657 aaKnown RBP14.4□□□□□ -0.1
CIITA-213ENST00000618327 UROC1Q96N76 676 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 TSPAN18Q96SJ8 248 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
CIITA-213ENST00000618327 GOLGA8RI6L899 631 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 RPL9P32969 192 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 PHEXP78562 749 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 NAPEPLDQ6IQ20 393 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 WDR75Q8IWA0 830 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 KATNAL2Q8IYT4 538 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 GANCQ8TET4 914 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 SLC12A8A0AV02 714 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 DNAJB2P25686 324 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 PRKCZQ05513 592 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 SLC39A12Q504Y0 691 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 ABTB1Q969K4 478 aaPredicted RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 SDCCAG3Q96C92 435 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 HSFY1Q96LI6 401 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 XIRP1Q702N8 1843 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 GOLGA8QA0A0J9YX86 632 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 GOLGA8OA6NCC3 632 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 GOLGA8NF8WBI6 632 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 LGR5O75473 907 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 IKBKEQ14164 716 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 MMEL1Q495T6 779 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 FZD8Q9H461 694 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 NOP53Q9NZM5 478 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 BAG5Q9UL15 447 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 PCDHB12Q9Y5F1 795 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 DDX60Q8IY21 1712 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 PAPPAQ13219 1627 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 F5H5T6 163 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 POLBP06746 335 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 RARGP13631 454 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 NPR3P17342 541 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 POU5F1BQ06416 359 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 TBC1D1Q86TI0 1168 aaPredicted RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 HDAC7Q8WUI4 952 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms