RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 EHHADHQ08426 723 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 MYO1EQ12965 1108 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 KCNB1Q14721 858 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 CRY1Q16526 586 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 CCDC142Q17RM4 750 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 FAM173BQ6P4H8 233 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 C19orf48Q6RUI8 117 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 EPM2AIP1Q7L775 607 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 LIMS2Q7Z4I7 341 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 SFTPA1Q8IWL2 248 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 HSCBQ8IWL3 235 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 SCN4BQ8IWT1 228 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 CHCHD4Q8N4Q1 142 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 DEFB119Q8N690 84 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 ALLCQ8N6M5 410 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 TOP6BLQ8N6T0 577 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 KIAA1958Q8N8K9 716 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 TXNDC5Q8NBS9 432 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 GOLGA5Q8TBA6 731 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 FUBP3Q96I24 572 aaKnown RBP eCLIP9.1□□□□□ -0.95
GPC6-202ENST00000617456 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 ARPC5LQ9BPX5 153 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 TMEM74BQ9NUR3 256 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 RBAKQ9NYW8 714 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 CWC15Q9P013 229 aaKnown RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 USP25Q9UHP3 1055 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 EVLQ9UI08 416 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 MBD1Q9UIS9 605 aaPredicted RBP9.1□□□□□ -0.95
GPC6-202ENST00000617456 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
GPC6-202ENST00000617456 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 A0A087X0B3 334 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 SGK1O00141 431 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 SMAPO00193 183 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 TAF4O00268 1085 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 TNFRSF10BO14763 440 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 GABRDO14764 452 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 HCRTO43612 131 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 HUS1O60921 280 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 SKILP12757 684 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 HDCP19113 662 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 ITPKAP23677 461 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 PCSK1P29120 753 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 POLR2BP30876 1174 aaKnown RBP9.09□□□□□ -0.95
GPC6-202ENST00000617456 P2RY2P41231 377 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 SLC6A11P48066 632 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
GPC6-202ENST00000617456 MYL7Q01449 175 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 KCNA1Q09470 495 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 MAPRE1Q15691 268 aaKnown RBP9.09□□□□□ -0.95
GPC6-202ENST00000617456 DUOXA2Q1HG44 320 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 BMT2Q1RMZ1 405 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 CFAP221Q4G0U5 840 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 PIP4P1Q86T03 277 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 SPATA2LQ8IUW3 424 aaPredicted RBP9.09□□□□□ -0.95
GPC6-202ENST00000617456 SYT12Q8IV01 421 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 WDR49Q8IV35 697 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 C12orf56Q8IXR9 622 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 HDDC3Q8N4P3 179 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 C1orf127Q8N9H9 656 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 HMGB4Q8WW32 186 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 ANKRD36BP1Q96IX9 119 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 FNBP1Q96RU3 617 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 FAM213AQ9BRX8 229 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 IKZF4Q9H2S9 585 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 DEF6Q9H4E7 631 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 ZDHHC4Q9NPG8 344 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 ETAA1Q9NY74 926 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 GCNT4Q9P109 453 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 GTF3C4Q9UKN8 822 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 L1RE1Q9UN81 338 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 AGAP1Q9UPQ3 857 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 ACACAQ13085 2346 aa9.09□□□□□ -0.95
GPC6-202ENST00000617456 MYO16Q9Y6X6 1858 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 ASXL3Q9C0F0 2248 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 TCHHQ07283 1943 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 TCRBV21S2A2A0A5A6 115 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 LEFTY2O00292 366 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 STAU1O95793 577 aaKnown RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 F13A1P00488 732 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 CYP17A1P05093 508 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 PFKLP17858 780 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 RDXP35241 583 aaKnown RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 CASP5P51878 434 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 AP3M2P53677 418 aa9.08□□□□□ -0.96
GPC6-202ENST00000617456 MRPS21P82921 87 aaKnown RBP9.08□□□□□ -0.96
GPC6-202ENST00000617456 KDSRQ06136 332 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms