RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 MTAPQ13126 283 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 TEAD2Q15562 447 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF699Q32M78 642 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 VITQ6UXI7 678 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF852Q6ZMS4 543 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 RTL10Q7L3V2 364 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 NOP9Q86U38 636 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 SYCE1Q8N0S2 351 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 LRRN4CLQ8ND94 238 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ELMO3Q96BJ8 720 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 APOBEC3GQ9HC16 384 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ZFP14Q9HCL3 533 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 ASAH2Q9NR71 780 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 AFF4Q9UHB7 1163 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 NOCTQ9UK39 431 aaKnown RBP11.36□□□□□ -0.59
COL4A1-205ENST00000615732 SNX12Q9UMY4 172 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
COL4A1-205ENST00000615732 CACNA1BQ00975 2339 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 RTN2O75298 545 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 SOAT2O75908 522 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 ASS1P00966 412 aaKnown RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 KRT19P08727 400 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TUBB4BP68371 445 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 LMNB2Q03252 620 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 STXBP5Q5T5C0 1151 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TPGS2Q68CL5 300 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 CD302Q8IX05 232 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 EFCAB13Q8IY85 973 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TTC9BQ8N6N2 239 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 GPR161Q8N6U8 529 aaKnown RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 RBBP8NLQ8NC74 664 aaPredicted RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 DNASE1L2Q92874 299 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 SMARCD2Q92925 531 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 RSPRY1Q96DX4 576 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 CAPZA3Q96KX2 299 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 ARID3AQ99856 593 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 ASB7Q9H672 318 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 SALL4Q9UJQ4 1053 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
COL4A1-205ENST00000615732 USP18Q9UMW8 372 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 PIAS3Q9Y6X2 628 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 TICRRQ7Z2Z1 1910 aa11.35□□□□□ -0.59
COL4A1-205ENST00000615732 MYH10P35580 1976 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF197O14709 1029 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 NCAM2O15394 837 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 FTCDO95954 541 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
COL4A1-205ENST00000615732 MMEP08473 750 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 NFICP08651 508 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 GZMAP12544 262 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 P4HA1P13674 534 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 CHRNB2P17787 502 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 MYL6P60660 151 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 FMO1Q01740 532 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 LPAL2Q16609 132 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 ERCC6LQ2NKX8 1250 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 CYP4A22Q5TCH4 519 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 JADE1Q6IE81 842 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TMEM270Q6UE05 265 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 DSTYKQ6XUX3 929 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 SCARA5Q6ZMJ2 495 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TRIM72Q6ZMU5 477 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TRIM11Q96F44 468 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF512Q96ME7 567 aaPredicted RBP11.34□□□□□ -0.59
COL4A1-205ENST00000615732 NELL2Q99435 816 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TRMT61BQ9BVS5 477 aaKnown RBP11.34□□□□□ -0.59
COL4A1-205ENST00000615732 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 ZNF334Q9HCZ1 680 aaPredicted RBP11.34□□□□□ -0.59
COL4A1-205ENST00000615732 TAS2R14Q9NYV8 317 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 MRPS17Q9Y2R5 130 aaKnown RBP11.34□□□□□ -0.59
COL4A1-205ENST00000615732 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 ANK1P16157 1881 aa11.34□□□□□ -0.59
COL4A1-205ENST00000615732 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 SLC38A8A6NNN8 435 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 HEPACAM2A8MVW5 462 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms