RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 TLR8Q9NR97 1041 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 SMPD4Q9NXE4 827 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 THADAQ6YHU6 1953 aa12.86□□□□□ -0.35
PDLIM2-218ENST00000614502 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 STX10O60499 249 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 ZDHHC11BP0C7U3 371 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 FAM200BP0CF97 657 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 ADH5P11766 374 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 GTF2H1P32780 548 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 TNFRSF4P43489 277 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 DGKEP52429 567 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 DLG4P78352 724 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 DPYDQ12882 1025 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 IL31Q6EBC2 164 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 PAQR9Q6ZVX9 377 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 TRMT11Q7Z4G4 463 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 CHORDC1Q9UHD1 332 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-218ENST00000614502 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 A0A0A0MRY4 1105 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 GOLGA6L4A6NEF3 574 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 K7EQS6 105 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 COCHO43405 550 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 ZNF202O95125 648 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 GRIA2P42262 883 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 ADAM9Q13443 819 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 BYSLQ13895 437 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 PLK5Q496M5 336 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 C2orf27AQ580R0 203 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 RHBDF2Q6PJF5 856 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 TADA2BQ86TJ2 420 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 ENGASEQ8NFI3 743 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 CYFIP2Q96F07 1278 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 PLXND1Q9Y4D7 1925 aa12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-218ENST00000614502 TM4SF5O14894 197 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 TLR5O60602 858 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 KAT7O95251 611 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 CCDC130P13994 396 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 GBP1P32455 592 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 ATP5C1P36542 298 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 MPLP40238 635 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 ASPAP45381 313 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 PSEN1P49768 467 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 SEC13P55735 322 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 CRY1Q16526 586 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 GAB4Q2WGN9 574 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 KRT39Q6A163 491 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 TCEAL6Q6IPX3 200 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 TCEAL3Q969E4 200 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 CDK5RAP1Q96SZ6 601 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 SMOQ99835 787 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 DUSP15Q9H1R2 295 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 GMIPQ9P107 970 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 SCML2Q9UQR0 700 aa12.83□□□□□ -0.36
PDLIM2-218ENST00000614502 CEP192Q8TEP8 1941 aa12.82□□□□□ -0.36
PDLIM2-218ENST00000614502 ANTXRLA6NF34 631 aa12.82□□□□□ -0.36
PDLIM2-218ENST00000614502 DCLK1O15075 740 aa12.82□□□□□ -0.36
PDLIM2-218ENST00000614502 CETN3O15182 167 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms