RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 EME2A4GXA9 379 aaPredicted RBP13.02□□□□□ -0.33
MSH6-213ENST00000614496 TMEM63AO94886 807 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 Q3C1V9 767 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 GALNTL6Q49A17 601 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 PYDC1Q8WXC3 89 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 NT5C1AQ9BXI3 368 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 TAGLN3Q9UI15 199 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 GRID1Q9ULK0 1009 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CORO1CQ9ULV4 474 aaPredicted RBP13.02□□□□□ -0.33
MSH6-213ENST00000614496 ZNF536O15090 1300 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 SIGLEC16A6NMB1 481 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 E5RJQ4 531 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 TCN1P20061 433 aaPredicted RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 PAPOLAP51003 745 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 WNT7BP56706 349 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 SLC25A3Q00325 362 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 BLMHQ13867 455 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 EFHC2Q5JST6 749 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 PPWD1Q96BP3 646 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 LAMB1P07942 1786 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 TCEA3O75764 348 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 USP1O94782 785 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 ABCG1P45844 678 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 UBAP2LQ14157 1087 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 FASTKD1Q53R41 847 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 ZC3H12AQ5D1E8 599 aaKnown RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 RNF220Q5VTB9 566 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 RINLQ6ZS11 566 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 GSDMBQ8TAX9 411 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 Q9H521 79 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 COMMD10Q9Y6G5 202 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 SMAPO00193 183 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 B4GALT5O43286 388 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 LGR5O75473 907 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 ENO3P13929 434 aaPredicted RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 GPX6P59796 221 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 SATB1Q01826 763 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 DSG1Q02413 1049 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 BOLA3Q53S33 107 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 CATSPER4Q7RTX7 472 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 ICA1LQ8NDH6 482 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 NKD2Q969F2 451 aaPredicted RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 SERAC1Q96JX3 654 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 ZNF395Q9H8N7 513 aaPredicted RBP13.01□□□□□ -0.33
MSH6-213ENST00000614496 SCN7AQ01118 1682 aa13.01□□□□□ -0.33
MSH6-213ENST00000614496 GRIN3BO60391 1043 aa13□□□□□ -0.33
MSH6-213ENST00000614496 GPC4O75487 556 aa13□□□□□ -0.33
MSH6-213ENST00000614496 ZMPSTE24O75844 475 aa13□□□□□ -0.33
MSH6-213ENST00000614496 COPAP53621 1224 aa13□□□□□ -0.33
MSH6-213ENST00000614496 KLF1Q13351 362 aaPredicted RBP13□□□□□ -0.33
MSH6-213ENST00000614496 TCHHL1Q5QJ38 904 aaPredicted RBP13□□□□□ -0.33
MSH6-213ENST00000614496 SH2D4BQ5SQS7 431 aa13□□□□□ -0.33
MSH6-213ENST00000614496 EEF1DP3Q658K8 133 aa13□□□□□ -0.33
MSH6-213ENST00000614496 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13□□□□□ -0.33
MSH6-213ENST00000614496 XAB2Q9HCS7 855 aaKnown RBP13□□□□□ -0.33
MSH6-213ENST00000614496 TSPAN16Q9UKR8 245 aa13□□□□□ -0.33
MSH6-213ENST00000614496 E9PBE3 544 aa13□□□□□ -0.33
MSH6-213ENST00000614496 KLHL41O60662 606 aa13□□□□□ -0.33
MSH6-213ENST00000614496 STAG3L1P0CL83 205 aa13□□□□□ -0.33
MSH6-213ENST00000614496 NDST1P52848 882 aa13□□□□□ -0.33
MSH6-213ENST00000614496 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
MSH6-213ENST00000614496 CGB2Q6NT52 195 aa13□□□□□ -0.33
MSH6-213ENST00000614496 MCUQ8NE86 351 aa13□□□□□ -0.33
MSH6-213ENST00000614496 APOL2Q9BQE5 337 aa13□□□□□ -0.33
MSH6-213ENST00000614496 PIM2Q9P1W9 311 aa13□□□□□ -0.33
MSH6-213ENST00000614496 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
MSH6-213ENST00000614496 DDX60LQ5H9U9 1706 aaKnown RBP13□□□□□ -0.33
MSH6-213ENST00000614496 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
MSH6-213ENST00000614496 KCNA2P16389 499 aa13□□□□□ -0.33
MSH6-213ENST00000614496 RBP5P82980 135 aa13□□□□□ -0.33
MSH6-213ENST00000614496 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
MSH6-213ENST00000614496 FSCBQ5H9T9 825 aa13□□□□□ -0.33
MSH6-213ENST00000614496 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
MSH6-213ENST00000614496 FAM131BQ86XD5 332 aa13□□□□□ -0.33
MSH6-213ENST00000614496 RNF169Q8NCN4 708 aa13□□□□□ -0.33
MSH6-213ENST00000614496 UCMAQ8WVF2 138 aa13□□□□□ -0.33
MSH6-213ENST00000614496 OTUD5Q96G74 571 aa13□□□□□ -0.33
MSH6-213ENST00000614496 FBXL18Q96ME1 805 aa13□□□□□ -0.33
MSH6-213ENST00000614496 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
MSH6-213ENST00000614496 LYPLA1O75608 230 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms