RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 CDC25BP30305 580 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 ATXN1P54253 815 aaKnown RBP23.02■■□□□ 1.28
CBWD1-223ENST00000613988 FANCCQ00597 558 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 PAQR9Q6ZVX9 377 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 ACOT1Q86TX2 421 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 KIAA1958Q8N8K9 716 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 GAB3Q8WWW8 586 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 TAF4BQ92750 862 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 EZH1Q92800 747 aaPredicted RBP23.02■■□□□ 1.28
CBWD1-223ENST00000613988 SMARCD1Q96GM5 515 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 CHORDC1Q9UHD1 332 aaPredicted RBP23.02■■□□□ 1.28
CBWD1-223ENST00000613988 TRAF3IP3Q9Y228 551 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.02■■□□□ 1.28
CBWD1-223ENST00000613988 RALGAPA1Q6GYQ0 2036 aa23.02■■□□□ 1.28
CBWD1-223ENST00000613988 MED19A0JLT2 244 aaPredicted RBP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 SLC9A3R1O14745 358 aaPredicted RBP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 MBL2P11226 248 aaPredicted RBP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 SYT13Q7L8C5 426 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 CACNA2D4Q7Z3S7 1137 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ADGRG2Q8IZP9 1017 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 CCDC26Q8TAB7 109 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 SCAMP5Q8TAC9 235 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 OVCA2Q8WZ82 227 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 HHIPQ96QV1 700 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 DMAP1Q9NPF5 467 aaPredicted RBP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 SAMSN1Q9NSI8 373 aaKnown RBP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 CFAP97Q9P2B7 532 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 AP1G2O75843 785 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 VAMP7P51809 220 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ORC1Q13415 861 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 CSRP2Q16527 193 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ANKRD40Q6AI12 368 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 DDX42Q86XP3 938 aaKnown RBP eCLIP23.01■■□□□ 1.27
CBWD1-223ENST00000613988 FAM114A1Q8IWE2 563 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 FUKQ8N0W3 1084 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ANKRD20A12PQ8NF67 263 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 ACDQ96AP0 544 aa23.01■■□□□ 1.27
CBWD1-223ENST00000613988 SDK1Q7Z5N4 2213 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 TRIM49BA6NDI0 452 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 TNFRSF10BO14763 440 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 SCAMP3O14828 347 aaKnown RBP23■■□□□ 1.27
CBWD1-223ENST00000613988 AXIN1O15169 862 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 MAPK13O15264 365 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 ASS1P00966 412 aaKnown RBP23■■□□□ 1.27
CBWD1-223ENST00000613988 SERPINC1P01008 464 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 TPM3P06753 285 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 NR2F2P24468 414 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 OPRD1P41143 372 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 PIK3CAP42336 1068 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 NDST1P52848 882 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 SLC5A3P53794 718 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 PMS1P54277 932 aaKnown RBP23■■□□□ 1.27
CBWD1-223ENST00000613988 DMC1Q14565 340 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 C1orf220Q5T0J3 134 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 SPOPLQ6IQ16 392 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 CRYBG2Q8N1P7 616 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 DUSP9Q99956 384 aaKnown RBP23■■□□□ 1.27
CBWD1-223ENST00000613988 RTKNQ9BST9 563 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 KRT82Q9NSB4 513 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 COMMD8Q9NX08 183 aa23■■□□□ 1.27
CBWD1-223ENST00000613988 HLA-DRAP01903 254 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 CYP17A1P05093 508 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 CCDC130P13994 396 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 EEF1GP26641 437 aaKnown RBP22.99■■□□□ 1.27
CBWD1-223ENST00000613988 DHCR24Q15392 516 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 ZCWPW2Q504Y3 356 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 HECTD3Q5T447 861 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 PRR23CQ6ZRP0 262 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 INTS8Q75QN2 995 aaKnown RBP22.99■■□□□ 1.27
CBWD1-223ENST00000613988 UNC93AQ86WB7 457 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 SLC2A14Q8TDB8 520 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.99■■□□□ 1.27
CBWD1-223ENST00000613988 IL37Q9NZH6 218 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 IFNKQ9P0W0 207 aa22.99■■□□□ 1.27
CBWD1-223ENST00000613988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.98■■□□□ 1.27
CBWD1-223ENST00000613988 COCHO43405 550 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 AKAP3O75969 853 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 APBB3O95704 486 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 KRT13P13646 458 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 TRIM21P19474 475 aaKnown RBP22.98■■□□□ 1.27
CBWD1-223ENST00000613988 RPL13P26373 211 aaKnown RBP22.98■■□□□ 1.27
CBWD1-223ENST00000613988 ASPAP45381 313 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 SEC13P55735 322 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 UBASH3AP57075 661 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 NFIL3Q16649 462 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 GAB4Q2WGN9 574 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 EDRF1Q3B7T1 1238 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 C2orf27AQ580R0 203 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 SNX30Q5VWJ9 437 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 KBTBD6Q86V97 674 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 LOXL4Q96JB6 756 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 SMOQ99835 787 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 SRRTQ9BXP5 876 aaKnown RBP22.98■■□□□ 1.27
CBWD1-223ENST00000613988 IMPG2Q9BZV3 1241 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 TBC1D14Q9P2M4 693 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 HMGXB4Q9UGU5 601 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 LIMA1Q9UHB6 759 aaKnown RBP22.98■■□□□ 1.27
CBWD1-223ENST00000613988 SPAG17Q6Q759 2223 aa22.98■■□□□ 1.27
CBWD1-223ENST00000613988 MYO16Q9Y6X6 1858 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms