RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 CCDC110Q8TBZ0 833 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 PRPF31Q8WWY3 499 aaKnown RBP11.69□□□□□ -0.54
ATF3-211ENST00000613954 IFT43Q96FT9 208 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 ZNF184Q99676 751 aaPredicted RBP11.69□□□□□ -0.54
ATF3-211ENST00000613954 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 ETAA1Q9NY74 926 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 TAS2R1Q9NYW7 299 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 DNAJB4Q9UDY4 337 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 STYXL1Q9Y6J8 313 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 TLL2Q9Y6L7 1015 aa11.69□□□□□ -0.54
ATF3-211ENST00000613954 TBX10O75333 385 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
ATF3-211ENST00000613954 DLDP09622 509 aaKnown RBP11.68□□□□□ -0.54
ATF3-211ENST00000613954 RPL7AP62424 266 aaKnown RBP11.68□□□□□ -0.54
ATF3-211ENST00000613954 DUSP28Q4G0W2 176 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 ZNF484Q5JVG2 852 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 MTHFD1LQ6UB35 978 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 ARHGAP18Q8N392 663 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
ATF3-211ENST00000613954 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 NRG4Q8WWG1 115 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 CPT1BQ92523 772 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 OXNAD1Q96HP4 312 aaPredicted RBP11.68□□□□□ -0.54
ATF3-211ENST00000613954 KCNK13Q9HB14 408 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 SLC17A7Q9P2U7 560 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
ATF3-211ENST00000613954 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 GOLGA8MH3BSY2 632 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 CFHP08603 1231 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 SMPD1P17405 629 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 PGM1P36871 562 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 ETV4P43268 484 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 NEK3P51956 506 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 SLC18A2Q05940 514 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 CDK18Q07002 472 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 LAMTOR4Q0VGL1 99 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 BIRC2Q13490 618 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 IRF5Q13568 498 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 EFTUD2Q15029 972 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATF3-211ENST00000613954 TBCCQ15814 346 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 RINLQ6ZS11 566 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 NET1Q7Z628 596 aaPredicted RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 LRRC6Q86X45 466 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 ZNF606Q8WXB4 792 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 GATA6Q92908 595 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 MCEEQ96PE7 176 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 KCNK4Q9NYG8 393 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 TCRBV5S1A1TA0A578 114 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 FAM155AB1AL88 458 aaPredicted RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 F8VP50 259 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 I3L4J1 428 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 CIB2O75838 187 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 VNN1O95497 513 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 KRT7P08729 469 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 HOXC6P09630 235 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 RAB27AP51159 221 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 CACNA2D1P54289 1103 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 PTK7Q13308 1070 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 TRMT5Q32P41 509 aaKnown RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 DNAL1Q4LDG9 190 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 FNBP1LQ5T0N5 605 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 SPOPLQ6IQ16 392 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 ZBTB8OSQ8IWT0 167 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 TMEM35BQ8NCS4 154 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 TRAPPC12Q8WVT3 735 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 APBB2Q92870 758 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 PTPRN2Q92932 1015 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 TRIM4Q9C037 500 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 IQCGQ9H095 443 aaKnown RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 APOBEC3GQ9HC16 384 aaKnown RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 DDX43Q9NXZ2 648 aaKnown RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 AGO2Q9UKV8 859 aaKnown RBP11.67□□□□□ -0.54
ATF3-211ENST00000613954 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 COL1A2P08123 1366 aa11.67□□□□□ -0.54
ATF3-211ENST00000613954 FCHO1O14526 889 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 BANF1O75531 89 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 FAM155BO75949 473 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 INHBAP08476 426 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 MYL2P10916 166 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 HOXD8P13378 290 aaPredicted RBP11.66□□□□□ -0.54
ATF3-211ENST00000613954 TCF4P15884 667 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 ZNF132P52740 706 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
ATF3-211ENST00000613954 OTUD4Q01804 1114 aaKnown RBP11.66□□□□□ -0.54
ATF3-211ENST00000613954 ZNF252P-AS1Q0IIN9 211 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 DYNC1I2Q13409 638 aaKnown RBP11.66□□□□□ -0.54
ATF3-211ENST00000613954 THOC5Q13769 683 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms