RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 HOXD10P28358 340 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 ADMP35318 185 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 PIK3CAP42336 1068 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 FLT3LGP49771 235 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 CPT1AP50416 773 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 AP3M2P53677 418 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 OSTNP61366 133 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 RNF4P78317 190 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 ERCC6LQ2NKX8 1250 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 Q7L0L9 218 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 RSRC2Q7L4I2 434 aaKnown RBP8.98□□□□□ -0.97
CCL3-205ENST00000613928 ENOSF1Q7L5Y1 443 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 SRGAP1Q7Z6B7 1085 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 ZNF410Q86VK4 478 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 SLC47A2Q86VL8 602 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 EFCAB13Q8IY85 973 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 RPUSD2Q8IZ73 545 aaKnown RBP8.98□□□□□ -0.97
CCL3-205ENST00000613928 FBXL6Q8N531 539 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 DEFB123Q8N688 67 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 UBR7Q8N806 425 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 CPB2Q96IY4 423 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 FAM49AQ9H0Q0 323 aaPredicted RBP8.98□□□□□ -0.97
CCL3-205ENST00000613928 PRDM5Q9NQX1 630 aaPredicted RBP8.98□□□□□ -0.97
CCL3-205ENST00000613928 C1orf112Q9NSG2 853 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 SIRPGQ9P1W8 387 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 NUB1Q9Y5A7 615 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 UMODL1Q5DID0 1318 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 NRCAMQ92823 1304 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 ANK1P16157 1881 aa8.98□□□□□ -0.97
CCL3-205ENST00000613928 A0A0A6YYK5 440 aaPredicted RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 A0A1B0GUA9 196 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 B4GALT4O60513 344 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 SRGAP2O75044 1071 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 DUSP11O75319 330 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 GPR32O75388 356 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 LEFTY1O75610 366 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 PALMO75781 387 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 EOMESO95936 686 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CALCAP01258 141 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CLTAP09496 248 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CXCL8P10145 99 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CYP11B1P15538 503 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 FSTP19883 344 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 FGFR4P22455 802 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 HOXC8P31273 242 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 GJA9P57773 515 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 ZNF200P98182 395 aaPredicted RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 PURAQ00577 322 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 FMO1Q01740 532 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 TMEM62Q0P6H9 643 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CUL2Q13617 745 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 ELF2Q15723 593 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CPSF6Q16630 551 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCL3-205ENST00000613928 FSCN1Q16658 493 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 WHAMMP3Q1A5X7 153 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 RSPO4Q2I0M5 234 aaPredicted RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 NKAPLQ5M9Q1 402 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 TAF3Q5VWG9 929 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CDH24Q86UP0 819 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 CEP112Q8N8E3 955 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 DDX1Q92499 740 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 ARHGEF26Q96DR7 871 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 FAM81BQ96LP2 452 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 ALS2CR12Q96Q35 445 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 TLR10Q9BXR5 811 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 MTMR12Q9C0I1 747 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 UPF3AQ9H1J1 476 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 ISCUQ9H1K1 167 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 RPF1Q9H9Y2 349 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 SUCOQ9UBS9 1254 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 GTF2IRD1Q9UHL9 959 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
CCL3-205ENST00000613928 SNX12Q9UMY4 172 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 JRKLQ9Y4A0 524 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 SAR1BQ9Y6B6 198 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 NCANO14594 1321 aa8.97□□□□□ -0.97
CCL3-205ENST00000613928 UNC80Q8N2C7 3258 aa8.96□□□□□ -0.97
CCL3-205ENST00000613928 FAM170AA1A519 330 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 EFCAB8A8MWE9 144 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 LACTBL1A8MY62 500 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 ZNF185O15231 689 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 IL18RAPO95256 599 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 ASS1P00966 412 aaKnown RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 MMEP08473 750 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 PRLRP16471 622 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 NAP1L1P55209 391 aaKnown RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 MYL6P60660 151 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 NOP14P78316 857 aaKnown RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 NKX3-2P78367 333 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 RBM10P98175 930 aaKnown RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 TFAMQ00059 246 aaKnown RBP8.96□□□□□ -0.98
CCL3-205ENST00000613928 CDR2Q01850 454 aa8.96□□□□□ -0.98
CCL3-205ENST00000613928 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms