RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 RAB3IL1Q8TBN0 382 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 TRIB2Q92519 343 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 RUBCNQ92622 972 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SENP8Q96LD8 212 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SCINQ9Y6U3 715 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 RREB1Q92766 1687 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
FAM3A-221ENST00000612856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.6
FAM3A-221ENST00000612856 E2F8A0AVK6 867 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 CBX6O95503 412 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 CALB1P05937 261 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 ATP5DP30049 168 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 ACLYP53396 1101 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.6
FAM3A-221ENST00000612856 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.6
FAM3A-221ENST00000612856 EFHC2Q5JST6 749 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 MFSD4BQ5TF39 518 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 NMD3Q96D46 503 aaKnown RBP11.27□□□□□ -0.6
FAM3A-221ENST00000612856 TRIM11Q96F44 468 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.6
FAM3A-221ENST00000612856 ATRNL1Q5VV63 1379 aa11.27□□□□□ -0.6
FAM3A-221ENST00000612856 ARHGAP42A6NI28 874 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.61
FAM3A-221ENST00000612856 TMEM192Q8IY95 271 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 UCMAQ8WVF2 138 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 FAM136AQ96C01 138 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 RMDN1Q96DB5 314 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC188H7C350 402 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 GYG2O15488 501 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 SNX3O60493 162 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 ATP6V1G1O75348 118 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 IL18RAPO95256 599 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 SERPINB3P29508 390 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 IL9RQ01113 521 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 ITIH4Q14624 930 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 SNX17Q15036 470 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 LACTB2Q53H82 288 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 RAPH1Q70E73 1250 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 RHOT2Q8IXI1 618 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 OR6P1Q8NGX9 317 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 RPRD1AQ96P16 312 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-221ENST00000612856 SYT15Q9BQS2 421 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC68Q9H2F9 335 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
FAM3A-221ENST00000612856 GALNT8Q9NY28 637 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
FAM3A-221ENST00000612856 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MAPK13O15264 365 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MSCO60682 206 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MAFO75444 373 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 FESP07332 822 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 GSTT1P30711 240 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PTDSS1P48651 473 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CDR2Q01850 454 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 SLC18A3Q16572 532 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 FYB2Q5VWT5 728 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CD302Q8IX05 232 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 TTC25Q96NG3 672 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CIPCQ9C0C6 399 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RMI1Q9H9A7 625 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 TSPAN16Q9UKR8 245 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ODC1P11926 461 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CYP11B1P15538 503 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 COMTP21964 271 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CYP3A7P24462 503 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CPA2P48052 419 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 NAB2Q15742 525 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC85BQ15834 202 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 BBS5Q8N3I7 341 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 NDRG1Q92597 394 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 FAF2Q96CS3 445 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RMDN2Q96LZ7 410 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 FAM105AQ9NUU6 356 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 NKX1-2Q9UD57 310 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 COL24A1Q17RW2 1714 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CRCPO75575 148 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms