RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 IFT74Q96LB3 600 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 FAM167BQ9BTA0 163 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ROPN1BQ9BZX4 212 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 DRC3Q9H069 523 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ROPN1Q9HAT0 212 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CYP26B1Q9NR63 512 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF214Q9UL59 606 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 MYH9P35579 1960 aaKnown RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CDH16O75309 829 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF254O75437 659 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CBX6O95503 412 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 CST3P01034 146 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 TAC1P20366 129 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 SSTR1P30872 391 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 NOMO3P69849 1222 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 NFX1Q12986 1120 aaKnown RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 KLF1Q13351 362 aaPredicted RBP11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF568Q3ZCX4 644 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 LRRC43Q8N309 656 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 GRK7Q8WTQ7 553 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 MSTO1Q9BUK6 570 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 MYLK2Q9H1R3 596 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.62
PCDHGC3-202ENST00000611950 DGAT1O75907 488 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 OAS1P00973 400 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 MARK3P27448 753 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 POLD2P49005 469 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 HMGCS2P54868 508 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 MTTPP55157 894 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 ACTR2P61160 394 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 OGDHQ02218 1023 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 PDIA2Q13087 525 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 CUL2Q13617 745 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 LIN9Q5TKA1 542 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCDC89Q8N998 374 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 ASAP3Q8TDY4 903 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TMEM109Q9BVC6 243 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 BRCA2P51587 3418 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TSPAN1O60635 241 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 PSAPP07602 524 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 GSTT2BP0CG30 244 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 FGFR1P11362 822 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 GLULP15104 373 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 GARTP22102 1010 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 SP2Q02086 613 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 STRN3Q13033 797 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TMEM132BQ14DG7 1078 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLC1A5Q15758 541 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TRIM68Q6AZZ1 485 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 XRRA1Q6P2D8 792 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 ARHGEF18Q6ZSZ5 1173 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 EMC1Q8N766 993 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 SPERTQ8NA61 448 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 NSUN6Q8TEA1 469 aaKnown RBP11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 WDR60Q8WVS4 1066 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TRABDQ9H4I3 376 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 KIAA1586Q9HCI6 787 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 NDFIP2Q9NV92 336 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 FKBP14Q9NWM8 211 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 TRIM17Q9Y577 477 aa11.14□□□□□ -0.63
PCDHGC3-202ENST00000611950 K7ERI5 159 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 B4GALT4O60513 344 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ATP5DP30049 168 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 GDF10P55107 478 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CENPCQ03188 943 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 SMAD1Q15797 465 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ZACNQ401N2 412 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ABHD15Q6UXT9 468 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 USP37Q86T82 979 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 SIX5Q8N196 739 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 P3H4Q92791 437 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 NAF1Q96HR8 494 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 HNRNPABQ99729 332 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CEP290O15078 2479 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 PTPRAP18433 802 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 S100A1P23297 94 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 GCAP28676 217 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 MSH2P43246 934 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 RTP1P59025 263 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 EMC2Q15006 297 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms