RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 APBB2Q92870 758 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 LRRC39Q96DD0 335 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 HSFY1Q96LI6 401 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
PABPC1-224ENST00000610907 MRPL45Q9BRJ2 306 aaKnown RBP10.88□□□□□ -0.67
PABPC1-224ENST00000610907 SYT17Q9BSW7 474 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 PCDH18Q9HCL0 1135 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 SETD4Q9NVD3 440 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 GDAP2Q9NXN4 497 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■□□ 15.6
PABPC1-224ENST00000610907 GTF2IRD1Q9UHL9 959 aa10.88□□□□□ -0.67
PABPC1-224ENST00000610907 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 FOXO6A8MYZ6 492 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PIRO00625 290 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 TRDMT1O14717 391 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PAPSS1O43252 624 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 MGRN1O60291 552 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 ATP5HO75947 161 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 F2P00734 622 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 KCNE1P15382 129 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 SSTR1P30872 391 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 FOXN2P32314 431 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 BCAT1P54687 386 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PDE4CQ08493 712 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 BNIP1Q12981 228 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 XKR4Q5GH76 650 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 SPDYAQ5MJ70 313 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 HP1BP3Q5SSJ5 553 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 SH3PXD2AQ5TCZ1 1133 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 ICE2Q659A1 982 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 SCYL2Q6P3W7 929 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 LIMS2Q7Z4I7 341 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PSTKQ8IV42 348 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 CDKL3Q8IVW4 592 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PARP9Q8IXQ6 854 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 CCDC63Q8NA47 563 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 MCUQ8NE86 351 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 OR6B3Q8NGW1 331 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 LRRC8CQ8TDW0 803 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 ZMAT2Q96NC0 199 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 C11orf84Q9BUA3 381 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 TRIM6Q9C030 488 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 KLC2Q9H0B6 622 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 MLXIPLQ9NP71 852 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 NGRNQ9NPE2 291 aaKnown RBP10.87□□□□□ -0.67
PABPC1-224ENST00000610907 TEX264Q9Y6I9 313 aa10.87□□□□□ -0.67
PABPC1-224ENST00000610907 TCRBV7S3A2A0A539 114 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 A8MXQ7 604 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 CHUKO15111 745 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SPAG7O75391 227 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF189O75820 626 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZBED1O96006 694 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SMIM10L2AP0DMW4 78 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SMIM10L2BP0DMW5 78 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 CYP2C9P11712 490 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 YBX3P16989 372 aaKnown RBP eCLIP10.86□□□□□ -0.673e-36■□□□□ 10.8
PABPC1-224ENST00000610907 KRT4P19013 534 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ALDH3A1P30838 453 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 RPA3P35244 121 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 RGS7P49802 495 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ATP11AP98196 1134 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 RIPK1Q13546 671 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SEPT7Q16181 437 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 DPYSL2Q16555 572 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SOWAHAQ2M3V2 549 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 EFHC1Q5JVL4 640 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 FBXO47Q5MNV8 452 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 BZW1Q7L1Q6 419 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 STRADAQ7RTN6 431 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZC3H18Q86VM9 953 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 TMEM130Q8N3G9 435 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PQLC3Q8N755 202 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PCDH19Q8TAB3 1148 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF398Q8TD17 642 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 MZB1Q8WU39 189 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 DCAKDQ8WVC6 231 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PAIP2Q9BPZ3 127 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SNRNP25Q9BV90 132 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 VPS11Q9H270 941 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 C10orf88Q9H8K7 445 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ABCF3Q9NUQ8 709 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 IKBKGQ9Y6K9 419 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 USH1CQ9Y6N9 552 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF236Q9UL36 1845 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 A0A1W2PPM1 405 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 KPNA7A9QM74 516 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 KCNN4O15554 427 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ATP2C2O75185 946 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 GCATO75600 419 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms