RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM227BQ96M60 508 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 CHMP4AQ9BY43 222 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC25A32Q9H2D1 315 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 GLOD4Q9HC38 313 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 TMOD4Q9NZQ9 345 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 DNAJB11Q9UBS4 358 aa5.06□□□□□ -1.6
SMCHD1-213ENST00000609587 SPATA31A6Q5VVP1 1343 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 ADGRA2Q96PE1 1338 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 hCG_1642624A0A1W2PR95 340 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 PIP5K1BO14986 540 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 CCNT2O60583 730 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 NBNO60934 754 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 CSTBP04080 98 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 CHRM2P08172 466 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 PDIA3P30101 505 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 CHKAP35790 457 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 MTHFSP49914 203 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 PGDP52209 483 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 PTPRRQ15256 657 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 LY6KQ17RY6 165 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC5A9Q2M3M2 681 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 TUBB8Q3ZCM7 444 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 ZACNQ401N2 412 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC9A4Q6AI14 798 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC44A3Q8N4M1 653 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 GLG1Q92896 1179 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 HIST1H2AAQ96QV6 131 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 ZCWPW1Q9H0M4 648 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 OBP2BQ9NPH6 170 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 KLC4Q9NSK0 619 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 USP22Q9UPT9 525 aa5.05□□□□□ -1.6
SMCHD1-213ENST00000609587 A1L4Q6 167 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 LGALS16A8MUM7 142 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ADM5C9JUS6 153 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 PROB1E7EW31 1015 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 SNX2O60749 519 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 PECAM1P16284 738 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 NTSR1P30989 418 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 FOLR3P41439 243 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 GATMP50440 423 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 TIAL1Q01085 375 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 GPS1Q13098 491 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 PFKFB4Q16877 469 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ARHGAP15Q53QZ3 475 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 TMTC4Q5T4D3 741 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ZNF618Q5T7W0 954 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 MAVSQ7Z434 540 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ATG16L2Q8NAA4 619 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 LTV1Q96GA3 475 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ZDHHC12Q96GR4 267 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 HERPUD2Q9BSE4 406 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ALG8Q9BVK2 526 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 ALG13Q9NP73 1137 aaKnown RBP5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 EHD3Q9NZN3 535 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 LRFN1Q9P244 771 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 IGSF9Q9P2J2 1179 aa5.04□□□□□ -1.6
SMCHD1-213ENST00000609587 AQP12BA6NM10 295 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 VWC2LB2RUY7 222 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 AGPSO00116 658 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 NPC1O15118 1278 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 MPPED1O15442 326 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 VNN1O95497 513 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 ARP10275 920 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 MST1P26927 711 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 SLC5A2P31639 672 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 HALP42357 657 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 CLCN2P51788 898 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 NSUN2Q08J23 767 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 GALNT1Q10472 559 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 TXNRD1Q16881 649 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 ERCC6LQ2NKX8 1250 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 NBPF8Q3BBV2 869 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 PRR16Q569H4 304 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 CLEC9AQ6UXN8 241 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 ANKRD42Q8N9B4 389 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 SOCS4Q8WXH5 440 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 TFAP2BQ92481 460 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 CCT6BQ92526 530 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 R3HDM4Q96D70 268 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 PBKQ96KB5 322 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 RMDN3Q96TC7 470 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 VN1R3Q9BXE9 311 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 TMEM8AQ9HCN3 771 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 DKK3Q9UBP4 350 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 VPS51Q9UID3 782 aa5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 DRG1Q9Y295 367 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 MORC2Q9Y6X9 1032 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-213ENST00000609587 SALL3Q9BXA9 1300 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 PSMD9O00233 223 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 SYT5O00445 386 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 NXPH3O95157 252 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 FESP07332 822 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 SRGAP2BP0DMP2 458 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 ZFXP17010 805 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 RBL1P28749 1068 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms