RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 MAVSQ7Z434 540 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 CAND1Q86VP6 1230 aaKnown RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 MICU3Q86XE3 530 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 SIRT6Q8N6T7 355 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 OR56A3Q8NH54 315 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 DNAJB14Q8TBM8 379 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 HASPINQ8TF76 798 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 TMEM171Q8WVE6 324 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 SOCS4Q8WXH5 440 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 NR4A3Q92570 626 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 RSPRY1Q96DX4 576 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 MARK4Q96L34 752 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 C8orf48Q96LL4 319 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 STRBPQ96SI9 672 aaKnown RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 UNKQ9C0B0 810 aaKnown RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 BHMT2Q9H2M3 363 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 DHX36Q9H2U1 1008 aaKnown RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 FAM83DQ9H4H8 585 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 SMURF2Q9HAU4 748 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 GBA2Q9HCG7 927 aaPredicted RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 SNX15Q9NRS6 342 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 DUSP22Q9NRW4 184 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 GEMIN8Q9NWZ8 242 aaKnown RBP2.2□□□□□ -2.06
ITGB5-213ENST00000608945 STK32BQ9NY57 414 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 DLL3Q9NYJ7 618 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 SH3BP4Q9P0V3 963 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 ZNF212Q9UDV6 495 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 ADAMTS5Q9UNA0 930 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 PCDHGB6Q9Y5F9 930 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 CDY1Q9Y6F8 540 aa2.2□□□□□ -2.06
ITGB5-213ENST00000608945 TARM1B6A8C7 271 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 UBE2Q2LH0YL09 131 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 H7C4K7 107 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 CES2O00748 559 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 RRP9O43818 475 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 CAND2O75155 1236 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 IL18RAPO95256 599 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 PRKCGP05129 697 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 KRT18P05783 430 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 PARP1P09874 1014 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 NBPF7P0C2Y1 421 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 TXNP10599 105 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 MYCLP12524 364 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 IDEP14735 1019 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 IL1R2P27930 398 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 PGDP52209 483 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 ITGA8P53708 1063 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 BCAT1P54687 386 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 HOXA4Q00056 320 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 STK3Q13188 491 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 GRM1Q13255 1194 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 SAFBQ15424 915 aaKnown RBP eCLIP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 SF3B4Q15427 424 aaKnown RBP eCLIP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 ZIK1Q3SY52 487 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 C4orf46Q504U0 113 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 L1TD1Q5T7N2 865 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 SLC9A4Q6AI14 798 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 SERPINA13PQ6UXR4 307 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 NAPRTQ6XQN6 538 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 TRIM72Q6ZMU5 477 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 Q6ZWC4 215 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 RNF44Q7L0R7 432 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 COL23A1Q86Y22 540 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 CCDC33Q8N5R6 958 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 CCDC150Q8NCX0 1101 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 MAML1Q92585 1016 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 PHKBQ93100 1093 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 RPL36ALQ969Q0 106 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 TIFAQ96CG3 184 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 IQCDQ96DY2 449 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 DAZAP1Q96EP5 407 aaKnown RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 VPS50Q96JG6 964 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 MSLNLQ96KJ4 702 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 SNX22Q96L94 193 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 C17orf80Q9BSJ5 609 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 APOL5Q9BWW9 433 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 VN1R3Q9BXE9 311 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 FSD1LQ9BXM9 530 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 TRIM5Q9C035 493 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 TRIM36Q9NQ86 728 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 HEYLQ9NQ87 328 aaPredicted RBP2.19□□□□□ -2.06
ITGB5-213ENST00000608945 COL20A1Q9P218 1284 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 MID2Q9UJV3 735 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 AMFRQ9UKV5 643 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 CORO2BQ9UQ03 480 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 FAM50BQ9Y247 325 aa2.19□□□□□ -2.06
ITGB5-213ENST00000608945 MANSC4A6NHS7 340 aaPredicted RBP2.18□□□□□ -2.06
ITGB5-213ENST00000608945 LINC01548A6NM66 108 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 H7C1Q1 480 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 SMIM22K7EJ46 135 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 AP4M1O00189 453 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 CD3EAPO15446 510 aaKnown RBP2.18□□□□□ -2.06
ITGB5-213ENST00000608945 PRC1O43663 620 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 TMPRSS11DO60235 418 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 EXOC3O60645 756 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 GCATO75600 419 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 RNF8O76064 485 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 USP1O94782 785 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 TJP3O95049 919 aa2.18□□□□□ -2.06
ITGB5-213ENST00000608945 MT-ND5P03915 603 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms