RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZBED1O96006 694 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 AMHP03971 560 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 NOS2P35228 1153 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 PBX3P40426 434 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 TAZQ16635 292 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 SLC25A52Q3SY17 297 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 ZNF280DQ6N043 979 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 STRADAQ7RTN6 431 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 TEKT4Q8WW24 435 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 HSPH1Q92598 858 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 SLC2A13Q96QE2 648 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 TBCBQ99426 244 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 POPDC2Q9HBU9 364 aa22.56■■□□□ 1.2
USP6NL-204ENST00000606752 UTP11Q9Y3A2 253 aaKnown RBP22.56■■□□□ 1.2
USP6NL-204ENST00000606752 MYBL2P10244 700 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 TFE3P19532 575 aaPredicted RBP22.55■■□□□ 1.2
USP6NL-204ENST00000606752 PTGIRP43119 386 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 CCNG2Q16589 344 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 DCAF6Q58WW2 860 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 TMEM173Q86WV6 379 aaPredicted RBP22.55■■□□□ 1.2
USP6NL-204ENST00000606752 CCDC105Q8IYK2 499 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 SCML4Q8N228 414 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 FUBP3Q96I24 572 aaKnown RBP eCLIP22.55■■□□□ 1.2
USP6NL-204ENST00000606752 DCLK3Q9C098 648 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 CWH43Q9H720 699 aa22.55■■□□□ 1.2
USP6NL-204ENST00000606752 ESYT3A0FGR9 886 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 USP17L7P0C7H9 530 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 CYP2F1P24903 491 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 ADCY2Q08462 1091 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 PM20D1Q6GTS8 502 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 EIF1ADQ8N9N8 165 aaKnown RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 CASKIN2Q8WXE0 1202 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 IRGQQ8WZA9 623 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 NT5C3BQ969T7 300 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 RAB17Q9H0T7 212 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 CHST7Q9NS84 486 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 R3HDM2Q9Y2K5 976 aaKnown RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 FNDC1Q4ZHG4 1894 aaPredicted RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 YJEFN3A6XGL0 299 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 E7ENQ6 273 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 ENDOD1O94919 500 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 GRIK1P39086 918 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 CARSP49589 748 aaKnown RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 HFE2Q6ZVN8 426 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 JAMLQ86YT9 394 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 IFT81Q8WYA0 676 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 ATG4AQ8WYN0 398 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 SEC14L1Q92503 715 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 ZNF689Q96CS4 500 aaPredicted RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 B3GALT6Q96L58 329 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 ADAM33Q9BZ11 813 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 FEZ2Q9UHY8 353 aaPredicted RBP22.54■■□□□ 1.2
USP6NL-204ENST00000606752 RASAL2Q9UJF2 1139 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 STAP1Q9ULZ2 295 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 USP3Q9Y6I4 520 aa22.54■■□□□ 1.2
USP6NL-204ENST00000606752 H7C4K7 107 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 KCNJ1P48048 391 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 ARSEP51690 589 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 SNX1Q13596 522 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 PDK2Q15119 407 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 MAP7D3Q8IWC1 876 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 BCL7CQ8WUZ0 217 aaPredicted RBP22.53■■□□□ 1.2
USP6NL-204ENST00000606752 SLCO2A1Q92959 643 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 NPY6RQ99463 290 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 ERP44Q9BS26 406 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 TTPALQ9BTX7 342 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 OXCT2Q9BYC2 517 aaPredicted RBP22.53■■□□□ 1.2
USP6NL-204ENST00000606752 ABI2Q9NYB9 513 aaPredicted RBP22.53■■□□□ 1.2
USP6NL-204ENST00000606752 PCDHB5Q9Y5E4 795 aa22.53■■□□□ 1.2
USP6NL-204ENST00000606752 CAPN9O14815 690 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 MDM4O15151 490 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 ATP8B1O43520 1251 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 LTFP02788 710 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 FYNP06241 537 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 CD48P09326 243 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 SULT1E1P49888 294 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 CDH6P55285 790 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 DEFB103AP81534 67 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 CUL1Q13616 776 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 TRADDQ15628 312 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 VSTM1Q6UX27 236 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 ANKS3Q6ZW76 656 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 BHLHA9Q7RTU4 235 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 TAS1R1Q7RTX1 841 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 GSPT2Q8IYD1 628 aaKnown RBP22.52■■□□□ 1.2
USP6NL-204ENST00000606752 TRIM51Q9BSJ1 452 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 TBC1D4O60343 1298 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 EFEMP2O95967 443 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 WDR5P61964 334 aaKnown RBP22.52■■□□□ 1.2
USP6NL-204ENST00000606752 RTP2Q5QGT7 225 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 ERMARDQ5T6L9 678 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 SYPL2Q5VXT5 272 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 DUPD1Q68J44 220 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 BNIPLQ7Z465 357 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 ATL2Q8NHH9 583 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 AENQ8WTP8 325 aaKnown RBP22.52■■□□□ 1.2
USP6NL-204ENST00000606752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.52■■□□□ 1.2
USP6NL-204ENST00000606752 SNRNP25Q9BV90 132 aaKnown RBP22.52■■□□□ 1.2
USP6NL-204ENST00000606752 CALN1Q9BXU9 219 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms