RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 CCDC149Q6ZUS6 474 aa11.4□□□□□ -0.58
SHANK2-219ENST00000606715 MYO1HQ8N1T3 1032 aa11.4□□□□□ -0.58
SHANK2-219ENST00000606715 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.588e-7■■■■□ 23
SHANK2-219ENST00000606715 FDXACB1Q9BRP7 624 aaPredicted RBP11.4□□□□□ -0.58
SHANK2-219ENST00000606715 ADGRE3Q9BY15 652 aa11.4□□□□□ -0.58
SHANK2-219ENST00000606715 SPG21Q9NZD8 308 aa11.4□□□□□ -0.58
SHANK2-219ENST00000606715 ACKR2O00590 384 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 GZMAP12544 262 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 MSH3P20585 1137 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 PTPN7P35236 360 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 CHI3L1P36222 383 aaPredicted RBP11.4□□□□□ -0.59
SHANK2-219ENST00000606715 RARRES1P49788 294 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 CUL3Q13618 768 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 CLEC16AQ2KHT3 1053 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 ERLEC1Q96DZ1 483 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 SMPD4Q9NXE4 827 aa11.4□□□□□ -0.59
SHANK2-219ENST00000606715 PRMT3O60678 531 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 PHF2O75151 1096 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 SERPINB9P50453 376 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 GRAMD4Q6IC98 578 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 FAM180AQ6UWF9 173 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 OTOP1Q7RTM1 612 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 TFB1MQ8WVM0 346 aaKnown RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ABCG4Q9H172 646 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 CNTNAP2Q9UHC6 1331 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 GNRH1P01148 92 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 FYNP06241 537 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 CYP24A1Q07973 514 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ACOX1Q15067 660 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ZNF558Q96NG5 402 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 DDX47Q9H0S4 455 aaKnown RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ABCB6Q9NP58 842 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 BCL9LQ86UU0 1499 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 NFASCO94856 1347 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 TSPAN3O60637 253 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 CCDC22O60826 627 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 C21orf59P57076 290 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ARID5BQ14865 1188 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 VSIG10LQ86VR7 867 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 HORMAD1Q86X24 394 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ST13P4Q8IZP2 240 aaPredicted RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ZCCHC2Q9C0B9 1178 aaKnown RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 MLXIPLQ9NP71 852 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 NCK2O43639 380 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 TLL1O43897 1013 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ATP5BP06576 529 aaKnown RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 YWHAQP27348 245 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ALDH18A1P54886 795 aaKnown RBP11.39□□□□□ -0.59
SHANK2-219ENST00000606715 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 FBXO47Q5MNV8 452 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 BTNL9Q6UXG8 535 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 ZNF555Q8NEP9 628 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 PI4K2AQ9BTU6 479 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 AASDHPPTQ9NRN7 309 aa11.39□□□□□ -0.59
SHANK2-219ENST00000606715 MEI4A8MW99 385 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CYP7B1O75881 506 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 RASSF9O75901 435 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 BMP10O95393 424 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 PCNAP12004 261 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 POLR2EP19388 210 aaKnown RBP11.38□□□□□ -0.59
SHANK2-219ENST00000606715 TOB1P50616 345 aaPredicted RBP11.38□□□□□ -0.59
SHANK2-219ENST00000606715 SKP1P63208 163 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CREMQ03060 361 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 DGKZQ13574 1117 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 LY6KQ17RY6 165 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 FBXO44Q9H4M3 255 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 GPRC5CQ9NQ84 441 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 TRIM16O95361 564 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
SHANK2-219ENST00000606715 NECAB2Q7Z6G3 386 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 OSBPL8Q9BZF1 889 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 FRMPD4Q14CM0 1322 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
SHANK2-219ENST00000606715 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 HDAC4P56524 1084 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 PDK2Q15119 407 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 C16orf87Q6PH81 154 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CBWD2Q8IUF1 395 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 SOHLH2Q9NX45 425 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 PSTPIP1O43586 416 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CRTAMO95727 393 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CCDC159P0C7I6 412 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 AMD1P17707 334 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 RENBPP51606 427 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 SMTNL2Q2TAL5 461 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 DOK6Q6PKX4 331 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 PRUNE1Q86TP1 453 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 EXD1Q8NHP7 514 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 ZSCAN18Q8TBC5 510 aaPredicted RBP11.38□□□□□ -0.59
SHANK2-219ENST00000606715 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 GOLPH3Q9H4A6 298 aa11.38□□□□□ -0.59
SHANK2-219ENST00000606715 MRGBPQ9NV56 204 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms