RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ARF3P61204 181 aaPredicted RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ARF1P84077 181 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SLC13A2Q13183 592 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 PPP2R5CQ13362 524 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CTBP1Q13363 440 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SCARB2Q14108 478 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 RTP5Q14D33 572 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 GJC2Q5T442 439 aaPredicted RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 KIAA0408Q6ZU52 694 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 Q6ZVL8 140 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ANKS1BQ7Z6G8 1248 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SLC44A2Q8IWA5 706 aaPredicted RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ARL10Q8N8L6 244 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 DCBLD1Q8N8Z6 715 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 KCNH5Q8NCM2 988 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CEP70Q8NHQ1 597 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CSGALNACT1Q8TDX6 532 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ATP2A3Q93084 1043 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TSPAN18Q96SJ8 248 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 NOL10Q9BSC4 688 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 C1orf43Q9BWL3 253 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 BTBD2Q9BX70 525 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 MAGEB5Q9BZ81 275 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 DBNDD1Q9H9R9 158 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 INCENPQ9NQS7 918 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 TBC1D23Q9NUY8 699 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 GALNT8Q9NY28 637 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ADD3Q9UEY8 706 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ZHX1Q9UKY1 873 aaPredicted RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 MTO1Q9Y2Z2 717 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 PCNTO95613 3336 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 BTAF1O14981 1849 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 ARHGEF28Q8N1W1 1705 aaKnown RBP4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 PAPPAQ13219 1627 aa4.32□□□□□ -1.72
IGHV3-29-201ENST00000604817 WNK3Q9BYP7 1800 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 hCG_1807616A0A1W2PRN6 198 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PYCARD-AS1I3L0S3 204 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 F2RL2O00254 374 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PRICKLE3O43900 615 aaPredicted RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 AKR1B10O60218 316 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ENDOD1O94919 500 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PGM3O95394 542 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ABHD16AO95870 558 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 IGHDP01880 384 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ANXA1P04083 346 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 AMY1AP04745 511 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CHGBP05060 677 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CNPP09543 421 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 TXNP10599 105 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CYP2C8P10632 490 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 IL2RBP14784 551 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 FBLN1P23142 703 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 IGFBP6P24592 240 aaPredicted RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PIK3CAP42336 1068 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CCR9P51686 369 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 SNX16P57768 344 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 AP2B1P63010 937 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 EXOSC9Q06265 439 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 MGAT5Q09328 741 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ACVR2BQ13705 512 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 EIF4A2Q14240 407 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PUM1Q14671 1186 aaKnown RBP eCLIP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 SKIDA1Q1XH10 827 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 TRIM71Q2Q1W2 868 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CR1LQ2VPA4 569 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CTXN3Q4LDR2 81 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 VWA3BQ502W6 1294 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 TMTC4Q5T4D3 741 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 DPP8Q6V1X1 898 aaPredicted RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ZNF783Q6ZMS7 281 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 RTL10Q7L3V2 364 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 CXXC5Q7LFL8 322 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 KDELC2Q7Z4H8 507 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 GALNTL5Q7Z4T8 443 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 R3HCC1LQ7Z5L2 792 aaKnown RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 RSPH3Q86UC2 560 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 GATAD2AQ86YP4 633 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 C16orf71Q8IYS4 520 aaPredicted RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 APPL2Q8NEU8 664 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 OR56A3Q8NH54 315 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 PPP1R14CQ8TAE6 165 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 WDR48Q8TAF3 677 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 SNX21Q969T3 373 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 TMX3Q96JJ7 454 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 YME1L1Q96TA2 773 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 REEP2Q9BRK0 252 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 DESI2Q9BSY9 194 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ZNF518BQ9C0D4 1074 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 ABHD16BQ9H3Z7 469 aa4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 TAF1DQ9H5J8 278 aaPredicted RBP4.31□□□□□ -1.72
IGHV3-29-201ENST00000604817 MANSC1Q9H8J5 431 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms