RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C8orf74Q6P047 294 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 C4orf50Q6ZRC1 276 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC26A9Q7LBE3 791 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 FBXO22Q8NEZ5 403 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 SCAMP5Q8TAC9 235 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 RXFP2Q8WXD0 754 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 CFAP57Q96MR6 1250 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 LRRC4Q9HBW1 653 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 CYLDQ9NQC7 956 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 IP6K2Q9UHH9 426 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC27A5Q9Y2P5 690 aa18.17■□□□□ 0.5
PPFIA3-207ENST00000602716 FGF18O76093 207 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 ACADSBP45954 432 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 GLUD2P49448 558 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 PEX5P50542 639 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 PITX1P78337 314 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 DDR2Q16832 855 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 SCN4BQ8IWT1 228 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 GPR152Q8TDT2 470 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 CLP1Q92989 425 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 CAVIN3Q969G5 261 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 ACSF2Q96CM8 615 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 RAD9AQ99638 391 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 CLSTN3Q9BQT9 956 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 MAN1A1P33908 653 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 OR1D2P34982 312 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 GRIK1P39086 918 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 PGFP49763 221 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 MRPS5P82675 430 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 DSG1Q02413 1049 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 TAP1Q03518 808 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 IFRD2Q12894 506 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 KIAA1841Q6NSI8 718 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 FOXR1Q6PIV2 292 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 DDX53Q86TM3 631 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 VPS52Q8N1B4 723 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 CALR3Q96L12 384 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 SH3GL2Q99962 352 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 PCDHB5Q9Y5E4 795 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
PPFIA3-207ENST00000602716 YJEFN3A6XGL0 299 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 E7ENQ6 273 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 H7C4K7 107 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 TNFRSF10BO14763 440 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SHOX2O60902 331 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 LRCH4O75427 683 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 PDGFRAP16234 1089 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 GPD1P21695 349 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 CTNNA2P26232 953 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC5A3P53794 718 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 DAOAP59103 153 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 GPR17Q13304 367 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 NNTQ13423 1086 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SHHQ15465 462 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 NFE2Q16621 373 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 CDO1Q16878 200 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 CCDC14Q49A88 953 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 ATP13A4Q4VNC1 1196 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 OTUD1Q5VV17 481 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SLC8B1Q6J4K2 584 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 NIPA2Q8N8Q9 360 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 FAM76AQ8TAV0 307 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 FAM149B1Q96BN6 582 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 LCMT1Q9UIC8 334 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 IL1R2P27930 398 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SSR1P43307 286 aaKnown RBP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 ATP11AP98196 1134 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 LLGL1Q15334 1064 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 SRLQ86TD4 932 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 ZDHHC17Q8IUH5 632 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 FNIP1Q8TF40 1166 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 FUBP3Q96I24 572 aaKnown RBP eCLIP18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 GDF3Q9NR23 364 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 BACE2Q9Y5Z0 518 aa18.15■□□□□ 0.5
PPFIA3-207ENST00000602716 LAMA3Q16787 3333 aa18.14■□□□□ 0.5
PPFIA3-207ENST00000602716 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 GOLGA6CA6NDK9 693 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 FYNP06241 537 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 GOLGA6DP0CG33 693 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 ZNF143P52747 638 aaPredicted RBP18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 ATXN1P54253 815 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 USP46P62068 366 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 ALS2CLQ60I27 953 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 ANKS1BQ7Z6G8 1248 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 TSEN2Q8NCE0 465 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 PHOSPHO2Q8TCD6 241 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 PEBP4Q96S96 227 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 SEPT5Q99719 369 aaPredicted RBP18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 ZBP1Q9H171 429 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 GOLGA6AQ9NYA3 693 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms