RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.82■□□□□ 0.6
VRK3-225ENST00000601912 V9GYY5 206 aaPredicted RBP18.82■□□□□ 0.6
VRK3-225ENST00000601912 YJEFN3A6XGL0 299 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 E7ENQ6 273 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 TNFRSF10BO14763 440 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 FGF18O76093 207 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 LTFP02788 710 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 KRT1P04264 644 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 RPL10AP62906 217 aaKnown RBP18.82■□□□□ 0.6
VRK3-225ENST00000601912 ROR1Q01973 937 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 DDR2Q16832 855 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 ERCC6LQ2NKX8 1250 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 SLC25A52Q3SY17 297 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 SH3PXD2AQ5TCZ1 1133 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 CCDC70Q6NSX1 233 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 GPR65Q8IYL9 337 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 SP7Q8TDD2 431 aaPredicted RBP18.82■□□□□ 0.6
VRK3-225ENST00000601912 SEPT5Q99719 369 aaPredicted RBP18.82■□□□□ 0.6
VRK3-225ENST00000601912 FBXO44Q9H4M3 255 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
VRK3-225ENST00000601912 PCSK1NQ9UHG2 260 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 SSX2IPQ9Y2D8 614 aa18.82■□□□□ 0.6
VRK3-225ENST00000601912 GOLGA6L10A0A0M3HER8 536 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 CCDC188H7C350 402 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 TRUB2O95900 331 aaKnown RBP18.81■□□□□ 0.6
VRK3-225ENST00000601912 HAPLN1P10915 354 aaPredicted RBP18.81■□□□□ 0.6
VRK3-225ENST00000601912 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
VRK3-225ENST00000601912 CREMQ03060 361 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 AADACL2Q6P093 401 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 SCYL2Q6P3W7 929 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 STRADAQ7RTN6 431 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 MMGT1Q8N4V1 131 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
VRK3-225ENST00000601912 CLSTN3Q9BQT9 956 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.81■□□□□ 0.6
VRK3-225ENST00000601912 RBM12Q9NTZ6 932 aaKnown RBP18.81■□□□□ 0.6
VRK3-225ENST00000601912 RRN3Q9NYV6 651 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 MTUS1Q9ULD2 1270 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 SLC27A5Q9Y2P5 690 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 NR2E3Q9Y5X4 410 aa18.81■□□□□ 0.6
VRK3-225ENST00000601912 WDR27A2RRH5 827 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 CCDC85CA6NKD9 419 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 ADAM12O43184 909 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 NCAM1P13591 858 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 IL1R2P27930 398 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 TUFMP49411 452 aaKnown RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 SULT1E1P49888 294 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 COPS2P61201 443 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 IFRD2Q12894 506 aaPredicted RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 DUSP4Q13115 394 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 ATP13A4Q4VNC1 1196 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 BOLA3Q53S33 107 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 TPGS2Q68CL5 300 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 HFE2Q6ZVN8 426 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 SLC13A5Q86YT5 568 aaPredicted RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 NOA1Q8NC60 698 aaKnown RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 ZNF461Q8TAF7 563 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 MAIP1Q8WWC4 291 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 SPATA17Q96L03 361 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 C11orf84Q9BUA3 381 aaPredicted RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 AP1M1Q9BXS5 423 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 AFF4Q9UHB7 1163 aaKnown RBP18.8■□□□□ 0.6
VRK3-225ENST00000601912 RWDD3Q9Y3V2 267 aa18.8■□□□□ 0.6
VRK3-225ENST00000601912 LRRD1A4D1F6 860 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 RTN3O95197 1032 aaPredicted RBP18.79■□□□□ 0.6
VRK3-225ENST00000601912 PPP2R5EQ16537 467 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 BSPRYQ5W0U4 402 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 TXNRD3NBQ6F5E7 133 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 TTC9BQ8N6N2 239 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 NT5C3BQ969T7 300 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 RNF25Q96BH1 459 aaPredicted RBP18.79■□□□□ 0.6
VRK3-225ENST00000601912 CEP295NLQ96MC4 621 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 TBCBQ99426 244 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 KLHL11Q9NVR0 708 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 HSFX1Q9UBD0 423 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 NAALADL1Q9UQQ1 740 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 VNN2O95498 520 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 LINC00271P0C7V0 271 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 GPR15P49685 360 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 HDAC4P56524 1084 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 KCNT1Q5JUK3 1230 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 SDHAF4Q5VUM1 108 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 BEND5Q7L4P6 421 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 BHLHA9Q7RTU4 235 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 GPR161Q8N6U8 529 aaKnown RBP18.79■□□□□ 0.6
VRK3-225ENST00000601912 KLHL23Q8NBE8 558 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 KCTD6Q8NC69 237 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 SLITRK1Q96PX8 696 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 NPY6RQ99463 290 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 OSBPL8Q9BZF1 889 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 COMMD8Q9NX08 183 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 SCML2Q9UQR0 700 aa18.79■□□□□ 0.6
VRK3-225ENST00000601912 PATJQ8NI35 1801 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 M0QYT0 321 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 FSCN2O14926 492 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 ABLIM3O94929 683 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms