RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 RAB23Q9ULC3 237 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 SLC8A2Q9UPR5 921 aa23.93■■□□□ 1.42
SSBP4-209ENST00000601357 K7EQS6 105 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 TLR5O60602 858 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 LPAL2Q16609 132 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 DCAF17Q5H9S7 520 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-209ENST00000601357 PRR23BQ6ZRT6 265 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 CAMKK1Q8N5S9 505 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 TATDN2Q93075 761 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 SLC35C1Q96A29 364 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 RMDN1Q96DB5 314 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 OTUB2Q96DC9 234 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 OSER1Q9NX31 292 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 GMEB2Q9UKD1 530 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 MAN1B1Q9UKM7 699 aa23.92■■□□□ 1.42
SSBP4-209ENST00000601357 CYP26A1O43174 497 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 CD44P16070 742 aaKnown RBP23.91■■□□□ 1.42
SSBP4-209ENST00000601357 ACO1P21399 889 aaKnown RBP23.91■■□□□ 1.42
SSBP4-209ENST00000601357 EIF2DP41214 584 aaKnown RBP23.91■■□□□ 1.42
SSBP4-209ENST00000601357 RAD23BP54727 409 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 ZNF394Q53GI3 561 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 TCERG1LQ5VWI1 586 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 SLC4A11Q8NBS3 891 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 DHTKD1Q96HY7 919 aaPredicted RBP23.91■■□□□ 1.42
SSBP4-209ENST00000601357 DUSP16Q9BY84 665 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 DNAI2Q9GZS0 605 aa23.91■■□□□ 1.42
SSBP4-209ENST00000601357 PSMA7O14818 248 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 GREM1O60565 184 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 ADH1CP00326 375 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 RETP07949 1114 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 BMP6P22004 513 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 PXNP49023 591 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-209ENST00000601357 KIF11P52732 1056 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 MESP2Q0VG99 397 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 CCDC26Q8TAB7 109 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 USP33Q8TEY7 942 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 WBP2Q969T9 261 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 JAKMIP2Q96AA8 810 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 ACDQ96AP0 544 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 TMEM176AQ96HP8 235 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 HEXIM2Q96MH2 286 aaKnown RBP23.9■■□□□ 1.42
SSBP4-209ENST00000601357 NMUR1Q9HB89 426 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 PARD6AQ9NPB6 346 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 ARMCX3Q9UH62 379 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-209ENST00000601357 USP3Q9Y6I4 520 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 MYOFQ9NZM1 2061 aa23.9■■□□□ 1.42
SSBP4-209ENST00000601357 TBX18O95935 607 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 CHRM1P11229 460 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-209ENST00000601357 ADH5P11766 374 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 SLC6A11P48066 632 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 STIM1Q13586 685 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 DMC1Q14565 340 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 ISM2Q6H9L7 571 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 KLHDC10Q6PID8 442 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 CCDC186Q7Z3E2 898 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 C12orf40Q86WS4 652 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 BBS7Q8IWZ6 715 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 GAB3Q8WWW8 586 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 KLF16Q9BXK1 252 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-209ENST00000601357 NACA2Q9H009 215 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 SH3BP1Q9Y3L3 701 aa23.89■■□□□ 1.41
SSBP4-209ENST00000601357 A0A0A0MRY4 1105 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 ANTXRLA6NF34 631 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 GADD45BO75293 160 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-209ENST00000601357 PPP1R2P41236 205 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 LY6G5CQ5SRR4 150 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 ARHGAP17Q68EM7 881 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 FOXR2Q6PJQ5 311 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 HTR3DQ70Z44 454 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 ERMP1Q7Z2K6 904 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 PHTF2Q8N3S3 785 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 ZNF276Q8N554 614 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 FAM160A2Q8N612 972 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-209ENST00000601357 CEP63Q96MT8 703 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 HHIPQ96QV1 700 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 PNKPQ96T60 521 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.88■■□□□ 1.41
SSBP4-209ENST00000601357 DLL3Q9NYJ7 618 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 EBF1Q9UH73 591 aa23.88■■□□□ 1.41
SSBP4-209ENST00000601357 A0A1W2PQH9 124 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 HOXC11O43248 304 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-209ENST00000601357 LRP3O75074 770 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 ATP5C1P36542 298 aaKnown RBP23.87■■□□□ 1.41
SSBP4-209ENST00000601357 CUL2Q13617 745 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 MORC3Q14149 939 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 TTI2Q6NXR4 508 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-209ENST00000601357 SCD5Q86SK9 330 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 SFTPA1Q8IWL2 248 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 ETFBKMTQ8IXQ9 262 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 UBXN6Q9BZV1 441 aa23.87■■□□□ 1.41
SSBP4-209ENST00000601357 METTL14Q9HCE5 456 aaKnown RBP23.87■■□□□ 1.41
SSBP4-209ENST00000601357 CIZ1Q9ULV3 898 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-209ENST00000601357 PPP1R3GB7ZBB8 358 aa23.86■■□□□ 1.41
SSBP4-209ENST00000601357 PMM2O15305 246 aa23.86■■□□□ 1.41
SSBP4-209ENST00000601357 RPP40O75818 363 aaKnown RBP23.86■■□□□ 1.41
SSBP4-209ENST00000601357 IRF1P10914 325 aa23.86■■□□□ 1.41
SSBP4-209ENST00000601357 FOXK2Q01167 660 aa23.86■■□□□ 1.41
SSBP4-209ENST00000601357 GAD2Q05329 585 aa23.86■■□□□ 1.41
SSBP4-209ENST00000601357 SPEM2Q0P670 501 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms