RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	SYT15	Q9BQS2	421 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	TRIM9	Q9C026	710 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	PARVG	Q9HBI0	331 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	TBC1D14	Q9P2M4	693 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	DEC1	Q9P2X7	70 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	NFE2L3	Q9Y4A8	694 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	SNX9	Q9Y5X1	595 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	SLCO1B1	Q9Y6L6	691 aa		11.78	□□□□□ -0.52
NUP62-222	ENST00000600935	PRRT4	C9JH25	899 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935		F8VP50	259 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	TLX3	O43711	291 aa	Predicted RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	NDUFS2	O75306	463 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	IL18RAP	O95256	599 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	CD6	P30203	668 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	GRIK1	P39086	918 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	PPP3CC	P48454	512 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	TFAM	Q00059	246 aa	Known RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	TAF10	Q12962	218 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	C4orf50	Q6ZRC1	276 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	GPBP1	Q86WP2	473 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	BBS7	Q8IWZ6	715 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	LSM14A	Q8ND56	463 aa	Known RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	OTUB2	Q96DC9	234 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	PCED1B	Q96HM7	432 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	CDC6	Q99741	560 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	DUSP9	Q99956	384 aa	Known RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	SPHK2	Q9NRA0	654 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	BLOC1S4	Q9NUP1	217 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	WSB2	Q9NYS7	404 aa	Predicted RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	USP36	Q9P275	1121 aa	Known RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	NME7	Q9Y5B8	376 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	PCDHGB2	Q9Y5G2	931 aa		11.77	□□□□□ -0.53
NUP62-222	ENST00000600935	GOLGA8CP	A6NN73	597 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	KCNJ18	B7U540	433 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	WASH3P	C4AMC7	463 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	FLRT2	O43155	660 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	COCH	O43405	550 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	GREM1	O60565	184 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	PPP1R37	O75864	691 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	FAM13A	O94988	1023 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	CER1	O95813	267 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	MBL2	P11226	248 aa	Predicted RBP	11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	EIF2S3	P41091	472 aa	Known RBP	11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	MATK	P42679	507 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	MYO1E	Q12965	1108 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	NUMA1	Q14980	2115 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	SLFN12L	Q6IEE8	588 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	BRSK2	Q8IWQ3	736 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	CHPF	Q8IZ52	775 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	RHBDD1	Q8TEB9	315 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	TOE1	Q96GM8	510 aa	Known RBP	11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	C8orf48	Q96LL4	319 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	ST6GALNAC4	Q9H4F1	302 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	ITGA11	Q9UKX5	1188 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	CDH9	Q9ULB4	789 aa		11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	UBR5	O95071	2799 aa	Predicted RBP	11.76	□□□□□ -0.53
NUP62-222	ENST00000600935	MEI4	A8MW99	385 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935		E9PAM4	449 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	PLK4	O00444	970 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	BCAT2	O15382	392 aa	Predicted RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CACNG3	O60359	315 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	ABL1	P00519	1130 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	NCAM1	P13591	858 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CYP27A1	Q02318	531 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	KCNA1	Q09470	495 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	GNL2	Q13823	731 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	DHX8	Q14562	1220 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	DCAF12L1	Q5VU92	463 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	BTBD8	Q5XKL5	378 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	GRAMD4	Q6IC98	578 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	DHRS13	Q6UX07	377 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	METTL3	Q86U44	580 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CCDC83	Q8IWF9	413 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CSGALNACT2	Q8N6G5	542 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CADM4	Q8NFZ8	388 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	MYCBPAP	Q8TBZ2	947 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	POMGNT1	Q8WZA1	660 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	P2RY11	Q96G91	374 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	FAM213A	Q9BRX8	229 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	STRA6	Q9BX79	667 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	GPR174	Q9BXC1	333 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	MTMR12	Q9C0I1	747 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	MKRN2	Q9H000	416 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	DNAJC17	Q9NVM6	304 aa	Known RBP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	PTPRJ	Q12913	1337 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	CKAP5	Q14008	2032 aa		11.75	□□□□□ -0.53
NUP62-222	ENST00000600935	TP53BP1	Q12888	1972 aa	Predicted RBP	11.74	□□□□□ -0.53
NUP62-222	ENST00000600935		A0A1B0GVT2	93 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	VWA3A	A6NCI4	1184 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935		J3QKU1	62 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	TRIM66	O15016	1216 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	TNFSF14	O43557	240 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	PDGFRB	P09619	1106 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	ANXA13	P27216	316 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	MCM6	Q14566	821 aa		11.74	□□□□□ -0.53
NUP62-222	ENST00000600935	ANO4	Q32M45	955 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms