RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 CCDC149Q6ZUS6 474 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 ZDHHC17Q8IUH5 632 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TCEAL8Q8IYN2 117 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 ZDHHC14Q8IZN3 488 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 COG1Q8WTW3 980 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SMG7Q92540 1137 aaKnown RBP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 RTP3Q9BQQ7 232 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 DSEQ9UL01 958 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 MAFFQ9ULX9 164 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TMEM191CA6NGB0 347 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 A8MXQ7 604 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 KCNK3O14649 394 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MICAL2O94851 1124 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 PROSCO94903 275 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 CFHP08603 1231 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ODC1P11926 461 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ALADP13716 330 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ACADSBP45954 432 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 RPL34P49207 117 aaKnown RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 PEX5P50542 639 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MESDQ14696 234 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 DSTYKQ6XUX3 929 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ARCQ7LC44 396 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 OR6B3Q8NGW1 331 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 OR10T2Q8NGX3 314 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MAIP1Q8WWC4 291 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 C11orf70Q9BRQ4 267 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ARGLU1Q9NWB6 273 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 ANAPC7Q9UJX3 599 aa12.11□□□□□ -0.47
ZNF548-211ENST00000600927 TIMM13Q9Y5L4 95 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-211ENST00000600927 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
ZNF548-211ENST00000600927 CYB561D2O14569 222 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 ZNF185O15231 689 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 PSTPIP1O43586 416 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 SPOPO43791 374 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 GPR37L1O60883 481 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 SEC24AO95486 1093 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 COMTP21964 271 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 RWDD2BP57060 319 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 GPR17Q13304 367 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 BRD3Q15059 726 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 PPM1LQ5SGD2 360 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 WDR93Q6P2C0 686 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 OTOP3Q7RTS5 596 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 TMEM110Q86TL2 294 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 ADGRF2Q8IZF7 708 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 PDCL2Q8N4E4 241 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
ZNF548-211ENST00000600927 IPO4Q8TEX9 1081 aaKnown RBP12.1□□□□□ -0.47
ZNF548-211ENST00000600927 SLC35F5Q8WV83 523 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 KBTBD7Q8WVZ9 684 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 HNRNPABQ99729 332 aaKnown RBP12.1□□□□□ -0.47
ZNF548-211ENST00000600927 MRPL45Q9BRJ2 306 aaKnown RBP12.1□□□□□ -0.47
ZNF548-211ENST00000600927 C1QTNF1Q9BXJ1 281 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 RAB21Q9UL25 225 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 L1RE1Q9UN81 338 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 INSL5Q9Y5Q6 135 aa12.1□□□□□ -0.47
ZNF548-211ENST00000600927 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-211ENST00000600927 XYLBO75191 536 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 CALCAP01258 141 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 SP100P23497 879 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-211ENST00000600927 PCSK1P29120 753 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 CETN2P41208 172 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 BCAT1P54687 386 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 SLC8A3P57103 927 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 PDCLQ13371 301 aa12.09□□□□□ -0.47
ZNF548-211ENST00000600927 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms