RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 TADA3O75528 432 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 F9P00740 461 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 URODP06132 367 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 NOS2P35228 1153 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 MATKP42679 507 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 PTPN9P43378 593 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 TUFMP49411 452 aaKnown RBP13.35□□□□□ -0.27
ZNF548-210ENST00000600442 GPR17Q13304 367 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 PTPROQ16827 1216 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 TMEM31Q5JXX7 168 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 PAQR9Q6ZVX9 377 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 SPRED2Q7Z698 418 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 SCN4BQ8IWT1 228 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 SCML4Q8N228 414 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 RXFP2Q8WXD0 754 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 RUBCNQ92622 972 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 TBCBQ99426 244 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 RAD9AQ99638 391 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 CWH43Q9H720 699 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 POPDC2Q9HBU9 364 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 COMMD8Q9NX08 183 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 TMEM59LQ9UK28 342 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
ZNF548-210ENST00000600442 SCN1AP35498 2009 aa13.35□□□□□ -0.27
ZNF548-210ENST00000600442 NT5C1B-RDH14C9J2C7 533 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 PIK3R2O00459 728 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 B4GALT3O60512 393 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 TJP3O95049 919 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 GJB5O95377 273 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 FGGP02679 453 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 SOD2P04179 222 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 GLUD2P49448 558 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 PEX5P50542 639 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 ARPP19P56211 112 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 DEFB103AP81534 67 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 PSMD5Q16401 504 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 RAB41Q5JT25 222 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 RIN2Q8WYP3 895 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 SMOQ99835 787 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 MAK16Q9BXY0 300 aaKnown RBP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
ZNF548-210ENST00000600442 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 HCN4Q9Y3Q4 1203 aa13.34□□□□□ -0.27
ZNF548-210ENST00000600442 LCHNA4D1U4 455 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 F8VP50 259 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 F8W810 466 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TULP2O00295 520 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 DAB1O75553 588 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 KRT1P04264 644 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 GBP1P32455 592 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 ELF1P32519 619 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 SLC25A52Q3SY17 297 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 DCAF6Q58WW2 860 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 LLGL2Q6P1M3 1020 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TMCO2Q7Z6W1 182 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 PSTKQ8IV42 348 aaKnown RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 NUP93Q8N1F7 819 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 SLC39A11Q8N1S5 342 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 MMGT1Q8N4V1 131 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 EMC1Q8N766 993 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 JOSD2Q8TAC2 188 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 KRT35Q92764 455 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 MS4A14Q96JA4 679 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 ULBP1Q9BZM6 244 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TRIM7Q9C029 511 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 MTRRQ9UBK8 725 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
ZNF548-210ENST00000600442 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 TTC3P53804 2025 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 TARSL2A2RTX5 802 aaKnown RBP13.32□□□□□ -0.28
ZNF548-210ENST00000600442 GPR37L1O60883 481 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 ERLIN1O75477 346 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 GRAP2O75791 330 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 GJB6O95452 261 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 LTFP02788 710 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 PYGMP11217 842 aa13.32□□□□□ -0.28
ZNF548-210ENST00000600442 CYP2F1P24903 491 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms