RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.68■■■□□ 2.34
SSBP4-206ENST00000599699 CNTN6Q9UQ52 1028 aa29.68■■■□□ 2.34
SSBP4-206ENST00000599699 USP3Q9Y6I4 520 aa29.68■■■□□ 2.34
SSBP4-206ENST00000599699 M0QYV0 167 aa29.67■■■□□ 2.34
SSBP4-206ENST00000599699 C1orf228Q6PIY5 440 aa29.67■■■□□ 2.34
SSBP4-206ENST00000599699 RALGPS2Q86X27 583 aaPredicted RBP29.67■■■□□ 2.34
SSBP4-206ENST00000599699 ZSWIM1Q9BR11 485 aa29.67■■■□□ 2.34
SSBP4-206ENST00000599699 NAT10Q9H0A0 1025 aaKnown RBP29.67■■■□□ 2.34
SSBP4-206ENST00000599699 NMUR1Q9HB89 426 aa29.67■■■□□ 2.34
SSBP4-206ENST00000599699 ARIH1Q9Y4X5 557 aaPredicted RBP29.67■■■□□ 2.34
SSBP4-206ENST00000599699 PATJQ8NI35 1801 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 SHISA7A6NL88 538 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 RARGP13631 454 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 CTHP32929 405 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 PSEN1P49768 467 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 RAB41Q5JT25 222 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 CPA6Q8N4T0 437 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 ANKRD20A12PQ8NF67 263 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 ATP2A3Q93084 1043 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 VPS16Q9H269 839 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 OSER1Q9NX31 292 aa29.66■■■□□ 2.34
SSBP4-206ENST00000599699 LETM1O95202 739 aaPredicted RBP29.65■■■□□ 2.34
SSBP4-206ENST00000599699 TBX18O95935 607 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 RALAP11233 206 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 PTMSP20962 102 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 ATP5C1P36542 298 aaKnown RBP29.65■■■□□ 2.34
SSBP4-206ENST00000599699 PLA2G4AP47712 749 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 KRT31Q15323 416 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 ANO6Q4KMQ2 910 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 SIX6OS1Q8N1H7 587 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 SECISBP2LQ93073 1101 aaKnown RBP29.65■■■□□ 2.34
SSBP4-206ENST00000599699 LINC00597Q9H2U6 94 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 SIX2Q9NPC8 291 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 CYLDQ9NQC7 956 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 DNAJC12Q9UKB3 198 aa29.65■■■□□ 2.34
SSBP4-206ENST00000599699 MUC6Q6W4X9 2439 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 SCAMP3O14828 347 aaKnown RBP29.64■■■□□ 2.34
SSBP4-206ENST00000599699 ZBED1O96006 694 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 IRF1P10914 325 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 PTPN5P54829 565 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 ADIGQ0VDE8 80 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 KLHL40Q2TBA0 621 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 EML3Q32P44 896 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 PKDCCQ504Y2 493 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 C10orf120Q5SQS8 335 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 SCD5Q86SK9 330 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 TADA2BQ86TJ2 420 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 ARHGAP18Q8N392 663 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 ULBP1Q9BZM6 244 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.64■■■□□ 2.34
SSBP4-206ENST00000599699 DLGAP2Q9P1A6 1054 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 NUDT5Q9UKK9 219 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 SH3BP1Q9Y3L3 701 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 COL4A2P08572 1712 aa29.64■■■□□ 2.34
SSBP4-206ENST00000599699 F5P12259 2224 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 OTOL1A6NHN0 477 aaPredicted RBP29.63■■■□□ 2.33
SSBP4-206ENST00000599699 SLC9A3R1O14745 358 aaPredicted RBP29.63■■■□□ 2.33
SSBP4-206ENST00000599699 THAP12O43422 761 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 MED7O43513 233 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 LCP1P13796 627 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 CDK11BP21127 795 aaKnown RBP29.63■■■□□ 2.33
SSBP4-206ENST00000599699 GNA15P30679 374 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 RGS7P49802 495 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 AMPD2Q01433 879 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 NR1H3Q13133 447 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 TXNDC11Q6PKC3 985 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 AOPEPQ8N6M6 819 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 LSM14BQ9BX40 385 aaKnown RBP29.63■■■□□ 2.33
SSBP4-206ENST00000599699 ECT2Q9H8V3 914 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 MYO16Q9Y6X6 1858 aa29.63■■■□□ 2.33
SSBP4-206ENST00000599699 NFATC1O95644 943 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 TCF15Q12870 199 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 PON2Q15165 354 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 FKBP15Q5T1M5 1219 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 KCTD13Q8WZ19 329 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 SHC3Q92529 594 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 ZFRQ96KR1 1074 aaKnown RBP29.62■■■□□ 2.33
SSBP4-206ENST00000599699 CDK5RAP1Q96SZ6 601 aaKnown RBP29.62■■■□□ 2.33
SSBP4-206ENST00000599699 CLIC5Q9NZA1 410 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 DNMT3LQ9UJW3 386 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 AJAP1Q9UKB5 411 aaPredicted RBP29.62■■■□□ 2.33
SSBP4-206ENST00000599699 WDFY4Q6ZS81 3184 aa29.62■■■□□ 2.33
SSBP4-206ENST00000599699 BECN2A8MW95 431 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 MAGEA9P43362 315 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 YWHAGP61981 247 aaKnown RBP eCLIP29.61■■■□□ 2.33
SSBP4-206ENST00000599699 GOLGA8FQ08AF8 430 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 GOLGA8DPQ0D2H9 430 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 KCNMA1Q12791 1236 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 RAPGEF1Q13905 1077 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 PMF1Q6P1K2 205 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 RSRC2Q7L4I2 434 aaKnown RBP29.61■■■□□ 2.33
SSBP4-206ENST00000599699 KIAA1958Q8N8K9 716 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 SLC35F5Q8WV83 523 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 NDRG1Q92597 394 aaKnown RBP29.61■■■□□ 2.33
SSBP4-206ENST00000599699 CLDN23Q96B33 292 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 LMAN1LQ9HAT1 526 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 ACP6Q9NPH0 428 aa29.61■■■□□ 2.33
SSBP4-206ENST00000599699 HELZP42694 1942 aaKnown RBP29.61■■■□□ 2.33
SSBP4-206ENST00000599699 KIF26AQ9ULI4 1882 aaPredicted RBP29.6■■■□□ 2.33
SSBP4-206ENST00000599699 E2F8A0AVK6 867 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms