RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MPZL3Q6UWV2 235 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ZPBP2Q6X784 338 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 MON1AQ86VX9 555 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 GAS2L3Q86XJ1 694 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 C12orf56Q8IXR9 622 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ZC3H3Q8IXZ2 948 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 RGL4Q8IZJ4 473 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 IL17RCQ8NAC3 791 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ENOX1Q8TC92 643 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC22A12Q96S37 553 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 CYP2S1Q96SQ9 504 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 HNRNPABQ99729 332 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 DUSP9Q99956 384 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 PRDM16Q9HAZ2 1276 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 CGNQ9P2M7 1197 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 HSFX1Q9UBD0 423 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 CTNND2Q9UQB3 1225 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 STYXL1Q9Y6J8 313 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ANKRD63C9JTQ0 380 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ABLIM1O14639 778 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 CAPN9O14815 690 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 NFATC1O95644 943 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ATXN1LP0C7T5 689 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 HMGA1P17096 107 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 PROZP22891 400 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 AARSP49588 968 aaKnown RBP eCLIP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ZNF165P49910 485 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 MRPS21P82921 87 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 CFHR1Q03591 330 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 LRRC63Q05C16 580 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 KDSRQ06136 332 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 MESP2Q0VG99 397 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 GRIK2Q13002 908 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 NCAPHQ15003 741 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 EDRF1Q3B7T1 1238 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 EOGTQ5NDL2 527 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 EMC10Q5UCC4 262 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 SDHAF4Q5VUM1 108 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 KLHL10Q6JEL2 608 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC41A1Q8IVJ1 513 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ERLEC1Q96DZ1 483 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ZBTB45Q96K62 511 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 LINC00597Q9H2U6 94 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 PRORYQ9H606 182 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 CLMPQ9H6B4 373 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 DMAC2Q9NW81 257 aa14.82□□□□□ -0.04
SHKBP1-218ENST00000598907 ANK1P16157 1881 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 BICDL2A1A5D9 508 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 TRIM49BA6NDI0 452 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 IKBKBO14920 756 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 CALUO43852 315 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 CBFA2T3O75081 653 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 TADA3O75528 432 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 TYMPP19971 482 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 ADSSP30520 456 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 LRPAP1P30533 357 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 STX17P56962 302 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC36A4Q6YBV0 504 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 GLRX5Q86SX6 157 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC9A9Q8IVB4 645 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 DHX40Q8IX18 779 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 SYCP3Q8IZU3 236 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 GOLGA5Q8TBA6 731 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 SH3RF2Q8TEC5 729 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 CBX8Q9HC52 389 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 AGPAT3Q9NRZ7 376 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 CALCOCO1Q9P1Z2 691 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 CYP8B1Q9UNU6 501 aa14.81□□□□□ -0.04
SHKBP1-218ENST00000598907 UNC79Q9P2D8 2635 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 TRAV19A0A0A6YYK7 116 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 TISP43B9A030 160 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 ADAM23O75077 832 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 TOM1L1O75674 476 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 USP17L7P0C7H9 530 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 HAPLN1P10915 354 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 GARTP22102 1010 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC6A11P48066 632 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 NOLC1Q14978 699 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 SENP8Q96LD8 212 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 ARID3AQ99856 593 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 HAPLN2Q9GZV7 340 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 ZCWPW1Q9H0M4 648 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 IL21RQ9HBE5 538 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 TOR4AQ9NXH8 423 aa14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 UBQLN1Q9UMX0 589 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-218ENST00000598907 A0A0B4J269 797 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 HNRNPDLO14979 420 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 GABRG2P18507 467 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 MAOBP27338 520 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 MATR3P43243 847 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 LIG4P49917 911 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 FKBP3Q00688 224 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 MYL5Q02045 173 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 CAMK2BQ13554 666 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 GAB4Q2WGN9 574 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 SLFN12LQ6IEE8 588 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 LRRC69Q6ZNQ3 347 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms